Diff for "AnalyzingData/MNE_AllInOne" - Meg Wiki
location: Diff for "AnalyzingData/MNE_AllInOne"
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Revision 1 as of 2010-07-16 13:36:09
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Editor: YaaraErez
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Revision 2 as of 2010-07-16 13:40:02
Size: 868
Editor: YaaraErez
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'''Segment Head Surfaces:'''
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'''Prepare MRI Data for MNE:'''
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'''Prepare Source Space (Cortical Surface) for MNE:'''
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Align coordinate systems '''Align MEG and MRI coordinate systems'''
mne_analyze
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'''Set Up BEM Information for MNE:'''
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'''Compute Forward Solution:'''
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Average MEG Data, Compute Covariance Matrix: '''Average MEG Data, Compute Covariance Matrix:'''
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Compute Average Cortical Surface: '''Compute Average Cortical Surface:'''
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Create Inverse Operator: '''Create Inverse Operator (from Forward Solution):'''
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Compute Source Estimates: '''Compute Source Estimates (Apply Inverse Operator to MEG data):'''
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Average Source Estimates: '''Average Source Estimates:'''
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Extract ROI data: '''Extract ROI data:'''
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Visualisation: '''Visualisation:'''

Overview of MNE Processing Steps and Commands

Segment Head Surfaces: mne_watershed_bem

Prepare MRI Data for MNE: mne_setup_mri

Prepare Source Space (Cortical Surface) for MNE: mne_setup_source_space

Align MEG and MRI coordinate systems mne_analyze

Set Up BEM Information for MNE: mne_setup_forward_model

Compute Forward Solution: mne_do_forward_solution

Average MEG Data, Compute Covariance Matrix: mne_process_raw

Compute Average Cortical Surface: make_average_subject

Create Inverse Operator (from Forward Solution): mne_do_inverse_operator

Compute Source Estimates (Apply Inverse Operator to MEG data): mne_make_movie

Average Source Estimates: mne_average_estimates

Extract ROI data: mne_make_movie

Visualisation: mne_analyze

CbuMeg: AnalyzingData/MNE_AllInOne (last edited 2013-03-08 10:02:29 by localhost)