Overview of MNE Processing Steps and Commands

Pre-processing MRI Data in Freesurfer:

Segment Head Surfaces:

Prepare MRI Data for MNE:

Prepare Source Space (Cortical Surface) for MNE:

Align MEG and MRI coordinate systems:

Set Up BEM Information for MNE:

Compute Forward Solution:

Average MEG Data, Compute Covariance Matrix:

Compute Average Cortical Surface:

Create Inverse Operator (from Forward Solution):

Compute Source Estimates (Apply Inverse Operator to MEG data):

Average Source Estimates:

Extract ROI data: