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= Using the CBU imaging wiki = | = Using the CBU wiki system = |
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This wiki contains the collected and sometimes rather old recorded CBU wisdom about imaging. It is almost completely devoted to FMRI, and has a large bias towards StatisticalParametricMapping software, just because that is what we all use. | == Reporting problems == If you see anything that is wrong, broken, silly or annoying, please contact one of the AdminGroup, who take care of the wiki. |
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Most of the pages here are publicly readable, although you may have to have an approved login to read some pages. If you are not logged in, or have an login that is not approved, then you will get a message - "You are not allowed to view this page." | Most of the pages here are publicly readable, but you may need to have an approved login to read some pages. If you try to read such a page, and are not logged in, or have an login that is not approved, then you will get a message - "You are not allowed to view this page." |
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If you would like to see a page that seems to be restricted, and you think you need the information in the page, please MatthewBrett. | [[Anchor(login)]] To get an approved login, see GettingApproval. |
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== Making yourself a login == | If you want edit permissions or want to see internal pages, please email MatthewBrett, or failing that, one of the AdminGroup, with your login name. If you want CBU or Cambridge permissions, please let us know your affiliation. We will then add you to the necessary lists. |
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If you want to edit pages, or want to see the pages with special permissions, please make yourself a login, using the UserPreferences page. Make absolutely sure your chosen login name is a WikiWord, otherwise it will be difficult to give you permissions. A WikiWord has an initial capital letter, a lower case last letter, and at least on other capital letter surrounded by lower case letters somewhere in the word. For example, my login is MatthewBrett, and Ian Nimmo-Smith's login is IanNimmoSmith. | == Making home pages == |
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If you want edit permissions or want to see internal pages, please email MatthewBrett with your login name, and he will add you to the necessary lists. | Please see CbuBaseWiki:MakingHomePages == Configuring the wiki to your taste == See HelpOnUserPreferences - and make changes in your UserPreferences. Note that, if you like your text to be a bit smaller than the current wiki default, you can add `/wiki/smaller.css` to the '''User CSS URL''' field of your UserPreferences. |
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You will need an approved login to edit pages. In general we welcome help with editing pages, so please ask if you want to edit. | You will need an approved login to edit pages. In general we welcome help with editing pages, so please ask if you want to edit. |
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is very easy. For example if you wanted to add an image, just insert the text `attachment:my_image.png`. When you have saved the page, you can click on the link to upload the image as an attachment to the page. | is very easy. For example if you wanted to add an image, just insert the text {{{attachment:my_image.png}}}. When you have saved the page, you can click on the link to upload the image as an attachment to the page. See HelpOnLinking for more details. === Putting up documents that need access controls === Some of our pages and some of our documents may be restricted to people with CBU logins, or Cambridge logins. For pages that should be restricted to the CBU, add this as the first line in the page: {{{ #acl GoodGroup:admin,read,write,delete,revert CbuGroup:read }}} and for Cambridge (and CBU) pages: {{{ #acl CambridgeGoodGroup:admin,read,write,delete,revert CambridgeGroup:read }}} If you want to post documents with access controls, then attach them to a page with the access controls above, and the same access controls will apply. Don't link to the attachment directly, link to the page that has the attachment. So, if the document is often linked to, you probably want a very small bare page containing the attachment to avoid confusion. An example is [wiki:CbuImaging:MriSubjectScreening the MRI subject screening form]. |
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Making links is covered in the HelpOnLinking page - but also you can also use the InterWiki facility in our wiki farm to link between different wikis - for example - [wiki:CbuMriFacility/CbuMriFacility CBU MRI facility] | Making links is covered in the HelpOnLinking page - but also you can also use the InterWiki facility in our wiki farm to link between different wikis - for example - [wiki:CbuMriFacility:CbuMriFacility CBU MRI facility] |
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== Some advanced wiki features == === Making a pdf from a wiki page === If you you want a pdf version of the page to print out, then append `?action=CreatePdfDocument` to the page URL. You will get a form to set any options for pdf generation. Click the button 'Generate PDF' at the bottom of this form to generate a pdf - e.g. http://imaging.mrc-cbu.cam.ac.uk/imaging/UsingThisWiki?action=CreatePdfDocument === Using LaTeX expressions === For those of you who know what LaTeX is, you can also use LaTeX syntax to enter mathematical expressions - see eg: http://imaging.mrc-cbu.cam.ac.uk/imaging/LatexExample MatthewBrett |
Using the CBU wiki system
Reporting problems
If you see anything that is wrong, broken, silly or annoying, please contact one of the AdminGroup, who take care of the wiki.
Some pages are restricted to users with approved login names
Most of the pages here are publicly readable, but you may need to have an approved login to read some pages. If you try to read such a page, and are not logged in, or have an login that is not approved, then you will get a message - "You are not allowed to view this page."
Anchor(login) To get an approved login, see GettingApproval.
If you want edit permissions or want to see internal pages, please email MatthewBrett, or failing that, one of the AdminGroup, with your login name. If you want CBU or Cambridge permissions, please let us know your affiliation. We will then add you to the necessary lists.
Making home pages
Please see MakingHomePages
Configuring the wiki to your taste
See HelpOnUserPreferences - and make changes in your UserPreferences. Note that, if you like your text to be a bit smaller than the current wiki default, you can add /wiki/smaller.css to the User CSS URL field of your UserPreferences.
Editing pages
You will need an approved login to edit pages. In general we welcome help with editing pages, so please ask if you want to edit.
If you make edits to a page, please sign your edits somewhere by leaving your login name, e.g. I just wrote this (MatthewBrett)
Adding images and attachments
is very easy. For example if you wanted to add an image, just insert the text attachment:my_image.png. When you have saved the page, you can click on the link to upload the image as an attachment to the page. See HelpOnLinking for more details.
Putting up documents that need access controls
Some of our pages and some of our documents may be restricted to people with CBU logins, or Cambridge logins. For pages that should be restricted to the CBU, add this as the first line in the page:
#acl GoodGroup:admin,read,write,delete,revert CbuGroup:read
and for Cambridge (and CBU) pages:
#acl CambridgeGoodGroup:admin,read,write,delete,revert CambridgeGroup:read
If you want to post documents with access controls, then attach them to a page with the access controls above, and the same access controls will apply. Don't link to the attachment directly, link to the page that has the attachment. So, if the document is often linked to, you probably want a very small bare page containing the attachment to avoid confusion. An example is [wiki:MriSubjectScreening the MRI subject screening form].
Making links when editing pages
Making links is covered in the HelpOnLinking page - but also you can also use the InterWiki facility in our wiki farm to link between different wikis - for example - [wiki:CbuMriFacility CBU MRI facility]
This wiki has the InterWiki name of CbuImaging, and the MRI wiki is CbuMriFacility.
Some advanced wiki features
Making a pdf from a wiki page
If you you want a pdf version of the page to print out, then append ?action=CreatePdfDocument to the page URL. You will get a form to set any options for pdf generation. Click the button 'Generate PDF' at the bottom of this form to generate a pdf - e.g.
http://imaging.mrc-cbu.cam.ac.uk/imaging/UsingThisWiki?action=CreatePdfDocument
Using LaTeX expressions
For those of you who know what LaTeX is, you can also use LaTeX syntax to enter mathematical expressions - see eg: