Diff for "bids" - MRC CBU Imaging Wiki
location: Diff for "bids"
Differences between revisions 1 and 8 (spanning 7 versions)
Revision 1 as of 2023-12-08 16:14:53
Size: 110
Editor: DaceApsvalka
Comment:
Revision 8 as of 2024-03-13 15:51:09
Size: 1232
Editor: DaceApsvalka
Comment:
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
Intro... = BIDS tutorials =
[[https://bids.neuroimaging.io/|The Brain Imaging Data Structure]] (BIDS) is a standard for organising neuroimaging and behavioural data that enables easy '''sharing''', '''reuse''', and '''application''' of automatic pipelines and quality assurance protocols (such as [[https://bids-apps.neuroimaging.io/|BIDS Apps]], or your/your group's own pipelines).
Line 3: Line 4:
fMRI: [[https://imaging.mrc-cbu.cam.ac.uk/imaging/dicom-bids|DICOM to BIDS]] It is highly recommended to have your data organised in BIDS! We have created a [[https://github.com/MRC-CBU/BIDS_conversion/tree/main|GitHub Repository]] and two tutorials on how to convert your raw data into BIDS:
Line 5: Line 6:
MEG: FIF to BIDS  * [[https://github.com/MRC-CBU/BIDS_conversion/tree/main/MEG|MEG/EEG to BIDS]]
 * [[https://github.com/MRC-CBU/BIDS_conversion/tree/main/MRI|MRI to BIDS]]

The tutorials are CBU-specific but can be easily adapted to any other source of raw data and computing system.

A video of a mini-workshop walking through the 'MRI to BIDS' tutorial is on our !YouTube channel:

[[https://youtu.be/yQBGsZMttCc?si=y8RC0OlV7dMs1kh6|{{https://camo.githubusercontent.com/a9f9add00b58c28779a1d7e5141becbf4397a9039aafbcd162b8cdd0a5a2e6c3/68747470733a2f2f696d672e796f75747562652e636f6d2f76692f79514247735a4d747443632f302e6a7067||height=200}}]]

BIDS tutorials

The Brain Imaging Data Structure (BIDS) is a standard for organising neuroimaging and behavioural data that enables easy sharing, reuse, and application of automatic pipelines and quality assurance protocols (such as BIDS Apps, or your/your group's own pipelines).

It is highly recommended to have your data organised in BIDS! We have created a GitHub Repository and two tutorials on how to convert your raw data into BIDS:

The tutorials are CBU-specific but can be easily adapted to any other source of raw data and computing system.

A video of a mini-workshop walking through the 'MRI to BIDS' tutorial is on our YouTube channel:

https://youtu.be/yQBGsZMttCc?si=y8RC0OlV7dMs1kh6

CbuImaging: bids (last edited 2024-03-13 15:51:09 by DaceApsvalka)