SecondLevel - MRC CBU Imaging Wiki

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Second Level Analysis: Multiple Comparisons, SVC, ROI analysis

You can download a copy of Nadja and Ben's talks here: SecondLevel.ppt ROIAnalysis.pptx

Web Resources

Below is a list of web resources used in the talk

UCL's Pages

Multiple Subjects

RFX and FFX on The MIT Wiki
Penny and Holmes(2003)

ROI Analysis

ROI FAQ on The MIT Wiki
tal2mni & mni2tal scripts


Random Field Theory

Brett2003.pdf Brett et al., (2003) An Introduction to Random Field Theory
Worsley2003.pdf Worsley et al., (2003) Developments in Random Field Theory

ROI Analysis

Friston, K. J., Rotshtein, P., Geng, J. J., Sterzer, P., & Henson, R. N. (2006). A critique of functional localisers. Neuroimage, 30(4), 1077-87.

Saxe, R., Brett, M., & Kanwisher, N. (2006). Divide and conquer: a defense of functional localizers. Neuroimage, 30(4), 1088-96; discussion 1097-9.

Poldrack, R. a, & Mumford, J. a. (2009). Independence in ROI analysis: where is the voodoo? Social cognitive and affective neuroscience, 4(2), 208-13.

Begging the Question: The Non-Independence Error in fMRI Data Analysis, Edward Vul, Nancy Kanwisher

Nieto-Castanon, A., Ghosh, S. S., Tourville, J. a, & Guenther, F. H. (2003). Region of interest based analysis of functional imaging data. Neuroimage, 19(4), 1303-1316.

Poldrack, R. A., (2007) Region of Interest Analysis for fMRI. SCAN, (2) 67-70

Kawabata, Devlin (2011) Improving the reliability of functional localizers. Neuroimage