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== The schedule below is still work in progress - changes are still likely ==
We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation in January/February 2023. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.They will happen in the CBU's Lecture Theatre.		 We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation in January/February 2024. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.They will happen in the CBU's Lecture Theatre.
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Please contact OlafHauk with questions and feedback. Please contact OlafHauk with questions and feedback
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon''' '''Jan 15''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Anatomy for Cognitive Neuroscientists'''<<BR>> Moataz Assem ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2023.pdf|Slides]] ||


||<style="text-align:center;vertical-align:middle">'''Tue''' '''Jan 16 ''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2023.pdf|Slides]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Tue''' (!) '''Jan 9''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''A Field Day - Some Physics You May Find Useful''' <<BR>> Olaf Hauk<<BR>>[[attachment:Olaf Some Physics 9Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Jan 22''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2023.pdf|Slides]] [[attachment:FSL_DTI&TBSS.pdf|Demo]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2023.pdf|Slides]] [[attachment:MRTrix_tractography_2023.pdf|Demo]] ||
||<style="text-align:center;vertical-align:middle">'''Jan 23''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI I – Files and Data''' <<BR>> Dace Apšvalka <<BR>> https://github.com/dcdace/fMRI_training ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon''' '''Jan 15''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Anatomy for Cognitive Neuroscientists'''<<BR>> Moataz Assem [[attachment:Assem_anatomy_lecture_15Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2024.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue''' '''Jan 16''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2024.pdf|Slides]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Jan 29 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI II – Pre-procesing''' <<BR>> Dace Apšvalka<<BR>> https://github.com/dcdace/fMRI_training ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI III – Statistical Analysis''' <<BR>> Dace Apšvalka<<BR>> https://github.com/dcdace/fMRI_training || ||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Jan 22''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part1.pdf|Slides_preprocessing]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part2.pdf|Slides_TBSS]] ||
||<style="text-align:center;vertical-align:middle">'''Jan 23''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI: Introduction, Experimental design & Data ''' <<BR>> Dace Apšvalka <<BR>> [[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Jan 29 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI:''' '''Pre-processing & Analysis'''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI:''' '''Practical demo '''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 5''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1 24Jan22.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2 24Jan22.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Feb 6''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_25Jan22.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 5''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1_5Feb24.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2_5Feb24.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Feb 6''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_5Feb24.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 12 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Effective Connectivity for fMRI '''(incl. DCM demo) <<BR>> Rik Henson & Pranay Yadav<<BR>>[[attachment:COGNESTIC_fMRI_Connectivity.pdf|slides]], [[https://youtu.be/1VOKsWWLgjk|video]] [[attachment:Multimodal_DCM_cognestic_tutorial_fMRI.pdf|practicals]] ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Effective Connectivity for MEG/EEG''' (incl. DCM demo) <<BR>> Pranay Yadav & Rik Henson <<BR>> [[attachment:COGNESTIC_MEEG_DCM.pdf|slides]] [[https://www.youtube.com/watch?v=HNaAvKmVCYo|video]] [[attachment:Multimodal_DCM_cognestic_tutorial_MEEG.pdf|practicals]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 13 ''' ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 12 ''' ||<45% style="text-align:center;text-align:center">10-12.00:I<<BR>>'''Functional connectivity in fMRI'''<<BR>>Petar Raykov <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#connectivityfmri|materials]] [[https://www.youtube.com/watch?v=1VOKsWWLgjk|video]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''Effective Connectivity for fMRI (DCM)''' <<BR>> Rik Henson & Pranay Yadav<<BR>>[[attachment:CBU-Neuroimaging-Training-DCM-fMRI-demo-slides.pdf|DCM fMRI demo slides]], [[attachment:CBU-Neuroimaging-Training-DCM-PEB-demo-slides.pdf|DCM PEB demo slides]], [[https://youtu.be/1VOKsWWLgjk|video]], [[attachment:CBU-Neuroimaging-Training-DCM-fMRI.pdf|document]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 13 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Effective Connectivity for MEG/EEG (DCM)''' <<BR>> Pranay Yadav & Rik Henson <<BR>> [[attachment:CBU-Neuroimaging-Training-DCM-MEEG-demo-slides.pdf|DCM MEEG demo slides]], [[attachment:CBU-Neuroimaging-Training-DCM-PEB-demo-slides.pdf|DCM PEB demo slides]], [[https://www.youtube.com/watch?v=HNaAvKmVCYo|video]], [[attachment:CBU-Neuroimaging-Training-DCM-MEEG.pdf|document]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 19''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> ||<45% style="text-align:center;text-align:center">14.16.00:<<BR>> '''Graph Theory''' <<BR>> Isaac Sebenius<<BR>> [[https://www.caroline-nettekoven.com/slides/graph-theory-lecture/#/|slides]]<<BR>>[[https://uwoca-my.sharepoint.com/personal/cnetteko_uwo_ca/_layouts/15/stream.aspx?id=/personal/cnetteko_uwo_ca/Documents/Nettekoven_GraphTheory_Lecture_Cambridge_2023.mp4&ga=1|Lecture]] [[https://www.caroline-nettekoven.com/slides/graph-theory-exercises/#/|Exercises]] || ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 19''' ||<45% style="text-align:center;text-align:center">10.12.00:<<BR>> '''Graph Theory''' <<BR>> Isaac Sebenius<<BR>> [[attachment:COGNESTIC23-presentation_Sebenius.pdf|slides]]<<BR>> ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2022#rsa1|materials for The Decoding Toolbox]] <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#rsa2|materials for the RSA Toolbox]] [[attachment:INM24_MVPA_djm.pptx|Slides]] ||
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<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 26''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> ||<45% style="text-align:center;text-align:center"> ||

Introduction To Neuroimaging Methods

We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation in January/February 2024. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.They will happen in the CBU's Lecture Theatre.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk .

Our workshops are targeted at master’s/PhD students and post-doctoral researchers from the Cambridge cognitive neuroscience community. Look here for other training opportunities in and around Cambridge.

Please contact OlafHauk with questions and feedback


Tue (!) Jan 9

10-12.00:
A Field Day - Some Physics You May Find Useful
Olaf Hauk
PDF


Mon Jan 15

10-12.00:
Brain Anatomy for Cognitive Neuroscientists
Moataz Assem PDF

14-16.00:
MRI Physics I
Marta Correia
Slides

Tue Jan 16

10-12.00:
MRI Physics II
Marta Correia
Slides


Jan 22

10-12.00:
Introduction to diffusion MRI
Marta Correia
Slides_lecture Slides_preprocessing

14-16.00:
Advanced Diffusion MRI
Marta Correia
Slides_lecture Slides_TBSS

Jan 23

10-12:00:
fMRI: Introduction, Experimental design & Data
Dace Apšvalka
materials


Jan 29

10-12:00:
fMRI: Pre-processing & Analysis
Dace Apšvalka
materials

14-16:00:
fMRI: Practical demo
Dace Apšvalka
materials

Jan 30

10-12:00:
PET imaging
Maura Malpetti


Feb 5

10-12.00:
EEG/MEG I – Overview and pre-processing
Olaf Hauk
Jupyter notebook, slides, video

14-16.00:
EEG/MEG II – Head modelling and source estimation
Olaf Hauk
Jupyter notebook, slides, video

Feb 6

10-12:00:
EEG/MEG III – Time-frequency analysis and functional connectivity
Olaf Hauk
Jupyter notebook, slides, video


Feb 12

10-12.00:I
Functional connectivity in fMRI
Petar Raykov
materials video

14-16:00:
Effective Connectivity for fMRI (DCM)
Rik Henson & Pranay Yadav
DCM fMRI demo slides, DCM PEB demo slides, video, document

Feb 13

10-12:00:
Effective Connectivity for MEG/EEG (DCM)
Pranay Yadav & Rik Henson
DCM MEEG demo slides, DCM PEB demo slides, video, document


Feb 19

10.12.00:
Graph Theory
Isaac Sebenius
slides

14-16.00:
MVPA and RSA
Daniel Mitchell
materials for The Decoding Toolbox
materials for the RSA Toolbox Slides

Feb 20

10-12.00:
Brain Stimulation
Elizabeth Michael
previous slides video


Feb 26

10-12.00:
Neural Network Modelling
Jascha Achterberg

None: IntroductionNeuroimagingLectures (last edited 2024-02-19 09:44:51 by OlafHauk)