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= Lectures and Workshops "Introduction to Neuroimaging Methods" =
Lectures and workshops will take place on Wednesdays, 14.30, either in the CBU West Wing Seminar Room or Lecture Theatre (see below).
||Jan 15 ||14.30 ||A field day: Some physics you may find useful ||Olaf Hauk||Lecture ||45 min ||
||Jan 22||14.30||EEG/MEG 1: Basics and pre-processing||Olaf Hauk||Lecture||45 min||		 = Introduction To Neuroimaging Methods =
== The schedule below is still work in progress - changes are still likely ==
We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation in January/February 2023. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.They will happen in the CBU's Lecture Theatre.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk .

Our workshops are targeted at master’s/PhD students and post-doctoral researchers from the Cambridge cognitive neuroscience community. Look here for other [[education|training opportunities in and around Cambridge]].

Please contact OlafHauk with questions and feedback.

<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon''' '''Jan 15''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Anatomy for Cognitive Neuroscientists'''<<BR>> Moataz Assem ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2023.pdf|Slides]] ||
Line 7: Line 15:
||<style="text-align:center;vertical-align:middle">'''Tue''' '''Jan 16 ''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2023.pdf|Slides]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Jan 22''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2023.pdf|Slides]] [[attachment:FSL_DTI&TBSS.pdf|Demo]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2023.pdf|Slides]] [[attachment:MRTrix_tractography_2023.pdf|Demo]] ||
||<style="text-align:center;vertical-align:middle">'''Jan 23''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI I – Files and Data''' <<BR>> Dace Apšvalka <<BR>> https://github.com/dcdace/fMRI_training ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Jan 29 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI II – Pre-procesing''' <<BR>> Dace Apšvalka<<BR>> https://github.com/dcdace/fMRI_training ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI III – Statistical Analysis''' <<BR>> Dace Apšvalka<<BR>> https://github.com/dcdace/fMRI_training ||
||<style="text-align:center;vertical-align:middle">'''Jan 30 ''' ||<45% style="text-align:center;text-align:center">10-12:00:<<BR>> '''PET imaging'''<<BR>> Maura Malpetti <<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 5''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1 24Jan22.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2 24Jan22.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Feb 6''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_25Jan22.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 12 ''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Effective Connectivity for fMRI '''(incl. DCM demo) <<BR>> Rik Henson & Pranay Yadav<<BR>>[[attachment:COGNESTIC_fMRI_Connectivity.pdf|slides]], [[https://youtu.be/1VOKsWWLgjk|video]] [[attachment:Multimodal_DCM_cognestic_tutorial_fMRI.pdf|practicals]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''Effective Connectivity for MEG/EEG''' (incl. DCM demo) <<BR>> Pranay Yadav & Rik Henson <<BR>> [[attachment:COGNESTIC_MEEG_DCM.pdf|slides]] [[https://www.youtube.com/watch?v=HNaAvKmVCYo|video]] [[attachment:Multimodal_DCM_cognestic_tutorial_MEEG.pdf|practicals]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 13 ''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 19''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> ||<45% style="text-align:center;text-align:center">14.16.00:<<BR>> '''Graph Theory''' <<BR>> Isaac Sebenius<<BR>> [[https://www.caroline-nettekoven.com/slides/graph-theory-lecture/#/|slides]]<<BR>>[[https://uwoca-my.sharepoint.com/personal/cnetteko_uwo_ca/_layouts/15/stream.aspx?id=/personal/cnetteko_uwo_ca/Documents/Nettekoven_GraphTheory_Lecture_Cambridge_2023.mp4&ga=1|Lecture]] [[https://www.caroline-nettekoven.com/slides/graph-theory-exercises/#/|Exercises]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 20''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Brain Stimulation''' <<BR>> Elizabeth Michael <<BR>> previous [[attachment:IntroToTMS_JJ_2022.pdf|slides]] [[attachment:IntroToTMS_JJ_2022.mov|video]] ||<45% style="text-align:center;text-align:center"> ||




----

Introduction To Neuroimaging Methods

The schedule below is still work in progress - changes are still likely

We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation in January/February 2023. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.They will happen in the CBU's Lecture Theatre.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk .

Our workshops are targeted at master’s/PhD students and post-doctoral researchers from the Cambridge cognitive neuroscience community. Look here for other training opportunities in and around Cambridge.

Please contact OlafHauk with questions and feedback.


Mon Jan 15

10-12.00:
Brain Anatomy for Cognitive Neuroscientists
Moataz Assem

14-16.00:
MRI Physics I
Marta Correia
Slides

Tue Jan 16

10-12.00:
MRI Physics II
Marta Correia
Slides


Jan 22

10-12.00:
Introduction to diffusion MRI
Marta Correia
Slides Demo

14-16.00:
Advanced Diffusion MRI
Marta Correia
Slides Demo

Jan 23

10-12:00:
fMRI I – Files and Data
Dace Apšvalka
https://github.com/dcdace/fMRI_training


Jan 29

10-12:00:
fMRI II – Pre-procesing
Dace Apšvalka
https://github.com/dcdace/fMRI_training

14-16:00:
fMRI III – Statistical Analysis
Dace Apšvalka
https://github.com/dcdace/fMRI_training

Jan 30

10-12:00:
PET imaging
Maura Malpetti


Feb 5

10-12.00:
EEG/MEG I – Overview and pre-processing
Olaf Hauk
Jupyter notebook, slides, video

14-16.00:
EEG/MEG II – Head modelling and source estimation
Olaf Hauk
Jupyter notebook, slides, video

Feb 6

10-12:00:
EEG/MEG III – Time-frequency analysis and functional connectivity
Olaf Hauk
Jupyter notebook, slides, video


Feb 12

10-12:00:
Effective Connectivity for fMRI (incl. DCM demo)
Rik Henson & Pranay Yadav
slides, video practicals

14-16:00:
Effective Connectivity for MEG/EEG (incl. DCM demo)
Pranay Yadav & Rik Henson
slides video practicals

Feb 13

10-12.00:
MVPA and RSA
Daniel Mitchell


Feb 19

10-12.00:
Neural Network Modelling
Jascha Achterberg

14.16.00:
Graph Theory
Isaac Sebenius
slides
Lecture Exercises

Feb 20

10-12.00:
Brain Stimulation
Elizabeth Michael
previous slides video

None: IntroductionNeuroimagingLectures (last edited 2024-02-19 09:44:51 by OlafHauk)