= Obtaining p-values in random effects models in R = The pvals.fnc procedure which uses Monte-Carlo Markov Chain simulations to compute p-values for terms in random effect models will run in R 2,.10 and above with the lmer procedure which is in the lme4 library. An example of its use to assess differences between conditions (assumed to be fixed effects) is given below. {{{ library(foreign) x <- read.spss("C:\\Documents and Settings\\peterw\\Desktop\\My Documents\\My Documents2\\SAMI R LME4\\mask.sav") attach(x) library(lme4) install.packages("languageR") library(languageR) model <- lmer(ptotalfs ~ condition + (1|subj)) pvals.fnc(model) }}}