Differences between revisions 21 and 23 (spanning 2 versions)

The CBU Wikis

The CBU Imaging Wikis host a wealth of information on the design and analysis of EEG/MEG and fMRI studies.

Some of the links below also lead to our Methods Wiki and Statistics Wiki.


General

VNC Software Unix Survival Guide	CBU Computing Intranet Overview CBU Computing	If you are new... Matlab Intro Signal Processing Intro Courses/Lectures Introduction to Neuroimaging	Load Share	IIG IIG Schedule IMC Internal Admin	Tools for stimulus generation	Eye Tracking
Statistics Wiki	Interest Groups	Navigate our Wikis	Scripts


(f)MRI

Analysis Principles fMRI Handbook SPM Mini Course SPM docus	FreeSurfer	Sequences	Stimulus Delivery Psychophysiology	Diagnostics	Stats Principles RFX Design Efficiency
Brodmann Areas Neuroanatomy Tutorial	Introduction to fMRI - graduate seminar slides	MarsBar	MVPA	DTI	SPM scripts
The Multiple Demand System					AA (V4)


EEG/MEG

Analyzing Data	SPM5 SensorSPM SPM8	MNE	Maxfilter Script Diagnostics Maxfilter 2.2	Running Studies	Formalities MEG-MC
If you are new... EEG Intro	Vectorview Stimulus Delivery	MEG day	EEG Lab	Mailing Lists, Events, Links	CBU EEG/MEG publications EEG/MEG Literature

Hint: if you're using the search button on the left, be sure to press the "Text" button if you want to search the content of pages rather than just their titles.

-  ⇤ ← Revision 21 as of 2015-03-30 16:02:01 → 
  Size: 6595
  Editor: OlafHauk
  Comment:
+   ← Revision 23 as of 2015-03-30 16:12:57 → ⇥
  Size: 7520
  Editor: OlafHauk
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 8:
-||<style="TEXT-ALIGN:center">'''[[UsingVNC|VNC]]''' <<BR>><<BR>> '''[[AvailableSoftware|Software]]''' <<BR>><<BR>> '''[[CbuMethods:unixsurvivalguide|Unix Survival Guide]]''' ||<style="TEXT-ALIGN:center">'''[[http://intranet.mrc-cbu.cam.ac.uk/computing/|CBU Computing Intranet]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners/MatlabIntroCBU?action=AttachFile&do=get&target=RussellComputing.pdf|Overview CBU Computing]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMeg:Beginners|If you are new...]]'''<<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/MatlabLecturesSchedule|Matlab Intro]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/SignalAnalysisMatlabSchedule|Signal Processing Intro]]''' <<BR>><<BR>> '''[[CbuMethods:education|Courses/Lectures]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/LoadShare|Load Share]]''' ||<style="TEXT-ALIGN:center">'''[[ImagersInterestGroup|IIG]]''' <<BR>><<BR>>''' [[IigSchedule|IIG Schedule]] '''<<BR>><<BR>>'''[[http://intranet.mrc-cbu.cam.ac.uk/administration/unit-committees/imc/|IMC]]''' <<BR>><<BR>> '''[[http://intranet.mrc-cbu.cam.ac.uk/imaging/mriadmin/|Internal Admin]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMethods:stimdatabases|Tools for stimulus generation]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/EyeTracking|Eye Tracking]]''' ||
+||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/UsingVNC|VNC]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AvailableSoftware|Software]]''' <<BR>><<BR>> '''[[CbuMethods:http://wiki.mrc-cbu.cam.ac.uk/methods/unixsurvivalguide|Unix Survival Guide]]''' ||<style="TEXT-ALIGN:center">'''[[http://intranet.mrc-cbu.cam.ac.uk/computing/|CBU Computing Intranet]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners/MatlabIntroCBU?action=AttachFile&do=get&target=RussellComputing.pdf|Overview CBU Computing]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMeg:Beginners|If you are new...]]'''<<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/MatlabLecturesSchedule|Matlab Intro]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/SignalAnalysisMatlabSchedule|Signal Processing Intro]]''' <<BR>><<BR>> '''[[CbuMethods:education|Courses/Lectures]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/LoadShare|Load Share]]''' ||<style="TEXT-ALIGN:center">'''[[ImagersInterestGroup|IIG]]''' <<BR>><<BR>>''' [[IigSchedule|IIG Schedule]] '''<<BR>><<BR>>'''[[http://intranet.mrc-cbu.cam.ac.uk/administration/unit-committees/imc/|IMC]]''' <<BR>><<BR>> '''[[http://intranet.mrc-cbu.cam.ac.uk/imaging/mriadmin/|Internal Admin]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMethods:stimdatabases|Tools for stimulus generation]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/EyeTracking|Eye Tracking]]''' ||
 Line 18:
-||<style="TEXT-ALIGN:center">'''[[AnalysisPrinciples|Analysis Principles]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/|fMRI Handbook]]''' <<BR>><<BR>> '''[[SpmMiniCourse2008|SPM Mini Course]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc|SPM docus]]''' ||<style="TEXT-ALIGN:center">'''[[FreesurferGoodies|FreeSurfer]]''' ||<style="TEXT-ALIGN:center">'''[[ImagingSequences|Sequences]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/mri/CbuStimulusDelivery|Stimulus Delivery]]''' <<BR>><<BR>> '''[[CbuMethods:psychophysiology|Psychophysiology]]''' ||<style="TEXT-ALIGN:center">'''[[DataDiagnostics|Diagnostics]]''' ||<style="TEXT-ALIGN:center">'''[[PrinciplesStatistics|Stats Principles]]''' <<BR>><<BR>> '''[[PrinciplesRandomEffects|RFX]]''' <<BR>><<BR>> '''[[DesignEfficiency|Design Efficiency]]''' ||
||<style="TEXT-ALIGN:center">'''[[BrodmannAreas|Brodmann Areas]]''' <<BR>><<BR>> '''[[NeuroanatomyTutorial|Neuroanatomy Tutorial]]''' ||<style="TEXT-ALIGN:center">'''[[attachment:djm_gradseminar_2013.ppt|Introduction to fMRI - graduate seminar slides]]''' ||<style="TEXT-ALIGN:center">'''http://imaging.mrc-cbu.cam.ac.uk/imaging/MarsBar''' ||<style="TEXT-ALIGN:center">'''[[MultiVoxelPatternAnalysis|MVPA]]''' ||<style="TEXT-ALIGN:center">'''[[AnalyzingDiffusion|DTI]]''' ||<style="TEXT-ALIGN:center">'''[[http://www.mrc-cbu.cam.ac.uk/people/rik.henson/personal/analysis.html|SPM scripts]]''' ||
||<style="TEXT-ALIGN:center">'''[[MDsystem|The Multiple Demand System]]''' ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center">'''[[AA|AA (V4)]]''' ||
+||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AnalysisPrinciples|Analysis Principles]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/|fMRI Handbook]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/SpmMiniCourse|SPM Mini Course]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc|SPM docus]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/FreesurferGoodies|FreeSurfer]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/ImagingSequences|Sequences]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/mri/CbuStimulusDelivery|Stimulus Delivery]]''' <<BR>><<BR>> '''[[CbuMethods:http://wiki.mrc-cbu.cam.ac.uk/methods/psychophysiology|Psychophysiology]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/DataDiagnostics|Diagnostics]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/PrinciplesStatistics|Stats Principles]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/PrinciplesRandomEffects|RFX]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/DesignEfficiency|Design Efficiency]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/BrodmannAreas|Brodmann Areas]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/NeuroanatomyTutorial|Neuroanatomy Tutorial]]''' ||<style="TEXT-ALIGN:center">'''[[attachment:djm_gradseminar_2013.ppt|Introduction to fMRI - graduate seminar slides]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MarsBar|MarsBar]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MultiVoxelPatternAnalysis|MVPA]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AnalyzingDiffusion|DTI]]''' ||<style="TEXT-ALIGN:center">'''[[http://www.mrc-cbu.cam.ac.uk/people/rik.henson/personal/analysis.html|SPM scripts]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MDsystem|The Multiple Demand System]]''' ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AA|AA (V4)]]''' ||
 Line 29:
-||<style="text-align:center;">'''[[AnalyzingData|Analyzing Data]]''' ||<style="text-align:center;">'''[[SpmAnalysis|SPM5]]''' <<BR>><<BR>> '''[[SensorSpm|SensorSPM]]''' <<BR>><<BR>> '''[[Spm8Analysis|SPM8]]''' ||<style="text-align:center;">'''[[AnalyzingData/MNE_overview|MNE]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter|Maxfilter]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MaxfilterMatlabScript|Script]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/maxdiagnost|Diagnostics]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter_V2.2|Maxfilter 2.2]]''' <<BR>><<BR>> ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/RunningStudies|Running Studies]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/NecessaryFormalities|Formalities]]'''<<BR>> <<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MeetingsListsContacts|MEG-MC]]''' ||
+||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData|Analyzing Data]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis|SPM5]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/SensorSpm|SensorSPM]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Spm8Analysis|SPM8]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData/MNE_overview|MNE]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter|Maxfilter]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MaxfilterMatlabScript|Script]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/maxdiagnost|Diagnostics]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter_V2.2|Maxfilter 2.2]]''' <<BR>><<BR>> ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/RunningStudies|Running Studies]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/NecessaryFormalities|Formalities]]'''<<BR>> <<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MeetingsListsContacts|MEG-MC]]''' ||

MRC CBU Wiki

Quick Links

Search Wiki

Page Tools

The CBU Wikis