Diff for "WikiOverview" - Methods
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'''The CBU Imaging Wikis host a wealth of information on the design and analysis of EEG/MEG and fMRI studies.'''
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In summer 2007, a magnetoencephalography (MEG) device became fully operational at the CSBU, complementing the [[http://www.mrc-cbu.cam.ac.uk/EEG/|EEG lab]] established in 2000 and the [[CbuMriFacility:CbuMriFacility|MRI scanner]] built in 2005. The device installed at the CBU is a [[VectorviewDescription|306-channel Vectorview]] system ([[http://www.elekta.com/healthcare_international_elekta_neuromag.php|Elekta Neuromag]], Helsinki) which combines 204 planar gradiometers, 102 magnetometers and 124 EEG channels providing comprehensive high-density coverage of electromagnetic brain activity. Please participate in our '''[[https://www.surveymonkey.com/s/3JL2CZX|Methods Skills Survey]]''', which will help the development of future training events at the CBU. It is anonymous and should take about 10-15 minutes.
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Using MEG technology, we are now able to record brain activation in real time and produce "activation films" that indicate the spreading of excitation through different parts of the brain. The activation waves, or spatio-temporal patterns, can be related to cognitive processes, such as language comprehension, object analysis or motor planning.
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For an example, watch a movie of left-hemispheric [[attachment:MEG_Movie_VisualWord.wmv|brain activation evoked by a visually presented word]].
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= Shortcuts =
||||||||||||||<tablewidth="100%"style="text-align:center"> ||
||||||||||||||<#E0E0FF style="font-size:24;text-align:center">'''~+General+~''' ||
||||||||||||||<style="text-align:center"> ||
||<style="text-align:center;">'''[[CbuImaging:UsingVNC|VNC]]''' <<BR>><<BR>> '''[[CbuImaging:AvailableSoftware|Software]]''' <<BR>><<BR>> '''[[CbuMethods:unixsurvivalguide|Unix Survival Guide]]''' ||<style="text-align:center;">'''[[http://intranet.mrc-cbu.cam.ac.uk/computing/|CBU Computing Intranet]]''' <<BR>><<BR>> '''[[Beginners/MatlabIntroCBU?action=AttachFile&do=get&target=RussellComputing.pdf|Overview CBU Computing]]''' ||<style="text-align:center;">'''[[Beginners]]'''<<BR>><<BR>> '''[[CbuMethods:MatlabLecturesSchedule|Matlab Intro]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/SignalAnalysisMatlabSchedule|Signal Processing Intro]]''' <<BR>><<BR>> '''[[CbuMethods:education|Courses/Lectures]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging]]''' ||<style="text-align:center;">'''[[CbuImaging:LoadShare|Load Share]]''' ||<style="text-align:center;">'''[[CbuImaging:ImagersInterestGroup|IIG]]''' <<BR>><<BR>> '''[[CbuImaging:IigSchedule|IIG Schedule]]''' <<BR>><<BR>> '''[[http://intranet.mrc-cbu.cam.ac.uk/minutes/imc/|IMC]]''' <<BR>><<BR>> '''[[http://intranet.mrc-cbu.cam.ac.uk/imaging/|Internal Admin]]''' ||<style="text-align:center;">'''[[CbuMethods:stimdatabases|Tools for stimulus generation]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/EyeTracking|Eye Tracking]]''' ||
||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/statswiki|Statistics Wiki]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/CBUInterestGroups|Interest Groups]]''' ||<style="text-align:center;">'''[[CbuMethods:NavigateOurWiki|Navigate our Wikis]]''' ||[[http://intranet.mrc-cbu.cam.ac.uk/imaging/|intranet imaging pages]] ||
Some of the links below also lead to our [[http://imaging.mrc-cbu.cam.ac.uk/methods/|Methods Wiki]] and [[http://imaging.mrc-cbu.cam.ac.uk/statswiki|Statistics Wiki]].
||||||||||||||<tablewidth="100%"style="TEXT-ALIGN:center"> ||
||||||||||||||<#e8e8e8 style="TEXT-ALIGN:center">'''~+General+~''' ||
||||||||||||||<style="TEXT-ALIGN:center"> ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/UsingVNC|VNC]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AvailableSoftware|Software]]''' <<BR>><<BR>> '''[[CbuMethods:http://wiki.mrc-cbu.cam.ac.uk/methods/unixsurvivalguide|Unix Survival Guide]]''' ||<style="TEXT-ALIGN:center">'''[[http://intranet.mrc-cbu.cam.ac.uk/computing/|CBU Computing Intranet]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners/MatlabIntroCBU?action=AttachFile&do=get&target=RussellComputing.pdf|Overview CBU Computing]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMeg:Beginners|If you are new...]]'''<<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/MatlabLecturesSchedule|Matlab Intro]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/SignalAnalysisMatlabSchedule|Signal Processing Intro]]''' <<BR>><<BR>> '''[[CbuMethods:education|Courses/Lectures]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/methods/IntroductionNeuroimagingLectures|Introduction to Neuroimaging]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/LoadShare|Load Share]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/IigSchedule|IIG]]''' <<BR>><<BR>>''' [[http://imaging.mrc-cbu.cam.ac.uk/imaging/IigSchedule|IIG Schedule]] '''<<BR>><<BR>>'''[[http://intranet.mrc-cbu.cam.ac.uk/administration/unit-committees/imc/|IMC]]''' <<BR>><<BR>> '''[[http://intranet.mrc-cbu.cam.ac.uk/imaging/mriadmin/|Internal Admin]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/methods/stimdatabases|Tools for stimulus generation]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/EyeTracking|Eye Tracking]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/statswiki|Statistics Wiki]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/CBUInterestGroups|Interest Groups]]''' ||<style="TEXT-ALIGN:center">'''[[CbuMethods:NavigateOurWiki|Navigate our Wikis]]''' ||'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AvailableScripts|Scripts]]''' ||


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||||||||||||||<#e8e8e8 style="TEXT-ALIGN:center">'''~+fMRI Imaging+~''' || ||||||||||||||<#e8e8e8 style="TEXT-ALIGN:center">'''~+[[http://imaging.mrc-cbu.cam.ac.uk/imaging/CbuImaging|(f)MRI]]+~''' ||
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||<style="TEXT-ALIGN:center">'''[[AnalysisPrinciples|Analysis Principles]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/|fMRI Handbook]]''' <<BR>><<BR>> '''[[SpmMiniCourse2008|SPM Mini Course]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc|SPM docus]]''' ||<style="TEXT-ALIGN:center">'''[[FreesurferGoodies|FreeSurfer]]''' ||<style="TEXT-ALIGN:center">'''[[ImagingSequences|Sequences]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/mri/CbuStimulusDelivery|Stimulus Delivery]]''' <<BR>><<BR>> '''[[CbuMethods:psychophysiology|Psychophysiology]]''' ||<style="TEXT-ALIGN:center">'''[[DataDiagnostics|Diagnostics]]''' ||<style="TEXT-ALIGN:center">'''[[PrinciplesStatistics|Stats Principles]]''' <<BR>><<BR>> '''[[PrinciplesRandomEffects|RFX]]''' <<BR>><<BR>> '''[[DesignEfficiency|Design Efficiency]]''' ||
||<style="TEXT-ALIGN:center">'''[[BrodmannAreas|Brodmann Areas]]''' <<BR>><<BR>> '''[[NeuroanatomyTutorial|Neuroanatomy Tutorial]]''' ||<style="TEXT-ALIGN:center">'''MarsBar''' ||<style="TEXT-ALIGN:center">'''[[MeetingsListsContacts|Meetings etc.]]''' ||<style="TEXT-ALIGN:center">'''[[MultiVoxelPatternAnalysis|MVPA]]''' ||<style="TEXT-ALIGN:center">'''[[AnalyzingDiffusion|DTI]]''' ||<style="TEXT-ALIGN:center">'''[[http://www.mrc-cbu.cam.ac.uk/people/rik.henson/personal/analysis.html|SPM scripts]]''' ||
||<style="TEXT-ALIGN:center">'''[[MDsystem|The Multiple Demand System]]''' ||<style="TEXT-ALIGN:center">
[[attachment:djm_gradseminar_2013.ppt|Introduction to fMRI - graduate seminar slides]] ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center">'''[[AA|AA (ver. 4)]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AnalysisPrinciples|Analysis Principles]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/|fMRI Handbook]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/SpmMiniCourse|SPM Mini Course]]''' <<BR>><<BR>> '''[[http://www.fil.ion.ucl.ac.uk/spm/doc|SPM docus]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/FreesurferGoodies|FreeSurfer]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/ImagingSequences|Sequences]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/mri/CbuStimulusDelivery|Stimulus Delivery]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/methods/psychophysiology|Psychophysiology]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/DataDiagnostics|Diagnostics]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/PrinciplesStatistics|Stats Principles]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/PrinciplesRandomEffects|RFX]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/DesignEfficiency|Design Efficiency]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/BrodmannAreas|Brodmann Areas]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/NeuroanatomyTutorial|Neuroanatomy Tutorial]]''' ||<style="TEXT-ALIGN:center">'''[[attachment:djm_gradseminar_2013.ppt|Introduction to fMRI - graduate seminar slides]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MarsBar|MarsBar]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MultiVoxelPatternAnalysis|MVPA]]''' ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/AnalyzingDiffusion|DTI]]''' ||<style="TEXT-ALIGN:center">'''[[http://www.mrc-cbu.cam.ac.uk/people/rik.henson/personal/analysis.html|SPM scripts]]''' ||
||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/MDsystem|The Multiple Demand System]]''' ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center"> ||<style="TEXT-ALIGN:center">'''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/
AA|AA (V4)]]''' ||

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||||||||||||||<#E0E0FF style="font-size:24;text-align:center">'''~+MEG+~''' || ||||||||||||||<#E0E0FF style="font-size:24;text-align:center">'''~+[[http://imaging.mrc-cbu.cam.ac.uk/meg/CbuMeg|EEG/MEG]]+~''' ||
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||<style="text-align:center;">'''[[AnalyzingData|Analyzing Data]]''' ||<style="text-align:center;">'''[[SpmAnalysis|SPM5]]''' <<BR>><<BR>> '''[[SensorSpm|SensorSPM]]''' <<BR>><<BR>> '''[[Spm8Analysis|SPM8]]''' ||<style="text-align:center;">'''[[AnalyzingData/MNE_overview|MNE]]''' ||<style="text-align:center;">'''[[Maxfilter]]''' <<BR>><<BR>> '''[[MaxfilterMatlabScript|Script]]''' <<BR>><<BR>>'''[[maxdiagnost|Diagnostics]]''' <<BR>><<BR>>'''[[Maxfilter_V2.2|Maxfilter 2.2]]''' <<BR>><<BR>> ||<style="text-align:center;">'''[[RunningStudies|Running Studies]]''' ||<style="text-align:center;">'''[[NecessaryFormalities|Formalities]]'''<<BR>> <<BR>> '''[[MeetingsListsContacts|MEG-MC]]''' ||
||<style="text-align:center;">'''[[Beginners]]''' <<BR>> <<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/IntroEEGMEG|EEG Intro]]''' ||<style="text-align:center;">'''[[VectorviewDescription|Vectorview]]''' '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/StimulusDetails|Stimulus Delivery]]''' ||<style="text-align:center;">'''[[IntroductionEEGMEG|MEG day]]''' ||<style="text-align:center;">'''[[CbuEeg:|EEG Lab]]''' ||<style="text-align:center;">'''[[MailingLists|Mailing Lists, Events, Links]]''' ||<style="text-align:center;">'''[[MEGpapersCBU|CBU EEG/MEG publications]]''' <<BR>><<BR>> '''[[MEGpapers|EEG/MEG Literature]]''' ||
||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData|Analyzing Data]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis|SPM5]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/SensorSpm|SensorSPM]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Spm8Analysis|SPM8]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData/MNE_overview|MNE]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter|Maxfilter]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MaxfilterMatlabScript|Script]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/maxdiagnost|Diagnostics]]''' <<BR>><<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter_V2.2|Maxfilter 2.2]]''' <<BR>><<BR>> ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/RunningStudies|Running Studies]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/NecessaryFormalities|Formalities]]'''<<BR>> <<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MeetingsListsContacts|MEG-MC]]''' ||
||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners|If you are new...]]''' <<BR>> <<BR>>'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/IntroEEGMEG|EEG Intro]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription|Vectorview]]''' '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/StimulusDetails|Stimulus Delivery]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/IntroductionEEGMEG|MEG day]]''' ||<style="text-align:center;">'''[[CbuEeg:|EEG Lab]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MailingLists|Mailing Lists, Events, Links]]''' ||<style="text-align:center;">'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MEGpapersCBU|CBU EEG/MEG publications]]''' <<BR>><<BR>> '''[[http://imaging.mrc-cbu.cam.ac.uk/meg/MEGpapers|EEG/MEG Literature]]''' ||
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'''[[http://www.mrc-cbu.cam.ac.uk/research/methods/imaginganalysis.html|Back to General Pages]].'''

None: WikiOverview (last edited 2021-02-17 12:49:52 by OlafHauk)