SPM DTI toolbox
This is a toolbox for playing with DTI data, including data import and export in DICOM, SPM and FSL format, creating mask images, and diagnosing slice artfacts, such as the DtiSpikingArtefact.
To install a development code copy on your system
You will need subversion, and three repositories, like this:
cd my_directory svn co http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti svn co http://imaging.mrc-cbu.cam.ac.uk/svn/utilities/devel utilities # And for testing svn co http://imaging.mrc-cbu.cam.ac.uk/svn/testing/devel testing
Put all three of cbudti, utilities and (optionally) testing on your matlab path
Subversion repository
At: http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel
For example, to get a copy of the current state of the development code:
svn export http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti
(this results in a new cbudti directory containing the code. To use it, put it on your matlab path (addpath /your/directory/cbudti).
To check out a versioned copy for editing or reviewing changes:
svn co http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti
Then (if you have permission) edit some file.
Then:
svn commit -m 'A comment'
And:
cd cbudti; svn update
to get the latest repository data into your working copy in the cbudti subdirectory.