SPM DTI toolbox

This is a toolbox for playing with DTI data, including data import and export in DICOM, SPM and FSL format, creating mask images, and diagnosing slice artfacts, such as the DtiSpikingArtefact.

To install a development code copy on your system

You will need subversion, and three repositories, like this:

cd my_directory
svn co http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti
svn co http://imaging.mrc-cbu.cam.ac.uk/svn/utilities/devel utilities
# And for testing
svn co http://imaging.mrc-cbu.cam.ac.uk/svn/testing/devel testing

Put all three of cbudti, utilities and (optionally) testing on your matlab path

Subversion repository

At: http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel

For example, to get a copy of the current state of the development code:

svn export http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti

(this results in a new cbudti directory containing the code. To use it, put it on your matlab path (addpath /your/directory/cbudti).

To check out a versioned copy for editing or reviewing changes:

svn co http://imaging.mrc-cbu.cam.ac.uk/svn/cbudti/devel cbudti

Then (if you have permission) edit some file.

Then:

svn commit -m 'A comment'

And:

cd cbudti; svn update

to get the latest repository data into your working copy in the cbudti subdirectory.

MatthewBrett