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We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2025. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge. We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2026. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to everyone.
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Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk . Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to [[mailto:skillstraining-subscribe@mrc-cbu.cam.ac.uk|skillstraining-subscribe (a t) mrc-cbu.cam.ac.uk]].
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Please contact OlafHauk with questions and feedback Please contact OlafHauk with questions and feedback.
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Tue''' (!) '''Jan 21''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''A Field Day - Some Physics You May Find Useful''' <<BR>> Olaf Hauk<<BR>>[[attachment:Olaf Some Physics 9Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center"> || ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>> '''Jan 12''' ||<45% style="text-align:center;text-align:center">--- ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>>'''The use of neuroimaging in cognitive neuroscience''' <<BR>>Rik Henson <<BR>>[[attachment:fMRI_review_Henson.pdf|PDF]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>''' Jan 13''' ||<45% style="text-align:center;text-align:center">--- ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Statistics for neuroimaging data''' <<BR>> Rik Henson<<BR>>[[https://github.com/RikHenson/Stats4Imaging|[GitHub]]] ||
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||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon''' '''Jan 27''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Anatomy for Cognitive Neuroscientists'''<<BR>> Moataz Assem [[attachment:Assem_anatomy_lecture_15Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2024.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue''' '''Jan 28''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2024.pdf|Slides]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>> '''Jan 19''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>>'''A Field Day - Some Physics You May Find Useful''' <<BR>> Olaf Hauk<<BR>>[[attachment:Olaf Some Physics 9Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>>'''Brain Anatomy for Cognitive Neuroscientists''' <<BR>>Moataz Assem <<BR>> '''Online!''' <<BR>> [[attachment:Assem_CBU_anatomy_lecture_Jan2025.pdf|PDF]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>''' Jan 20''' ||<45% style="text-align:center;text-align:center">--- ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Feb 3''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part1.pdf|Slides_preprocessing]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part2.pdf|Slides_TBSS]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 4''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI: Introduction, Experimental design & Data ''' <<BR>> Dace Apšvalka <<BR>> [[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>> '''Jan 26''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to MRI Physics''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2026.pdf|Slides]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Biophysics''' '''of fMRI and the BOLD signal''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2026.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>> '''Jan 27''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Structural MRI'''<<BR>> Marta Correia <<BR>> [[attachment:Freesurfer_2025.pdf|Freesurfer]] [[attachment:FSL_VBM_2025.pdf|VBM]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Term break''' ||<45% style="text-align:center;text-align:center"> ||<45% style="text-align:center;text-align:center"> || ||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 2''' ||<45% style="text-align:center;text-align:center">10-12:00:<<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part1.pdf|Slides_preprocessing]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part2.pdf|Slides_TBSS]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 3''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''PET imaging'''<<BR>> Maura Malpetti <<BR>> ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 17''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI:''' '''Pre-processing & Analysis'''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI:''' '''Practical demo '''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 18''' ||<45% style="text-align:center;text-align:center">10-12:00:<<BR>> '''PET imaging'''<<BR>> Maura Malpetti <<BR>> ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 9''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI: Introduction, Experimental design & Data ''' <<BR>> Dace Apšvalka <<BR>> [[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI:''' '''Pre-processing & Analysis'''<<BR>> Dace Apšvalka <<BR>> [[https://github.com/dcdace/fMRI_training/|materials]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 10''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI:''' '''Practical demo '''<<BR>> Dace Apšvalka <<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 24''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1_5Feb24.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2_5Feb24.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Feb 25''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_5Feb24.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 16''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Functional connectivity in fMRI'''<<BR>>Petar Raykov <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#connectivityfmri|materials]] [[https://www.youtube.com/watch?v=1VOKsWWLgjk|video]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>> '''Effective Connectivity''' <<BR>> Rik Henson <<BR>> [[attachment:CBUTraining_Henson_Connectivity.pdf|slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 17''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Network Analysis''' <<BR>> Kayson Fakhar ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mar 3''' ||<45% style="text-align:center;text-align:center">10-12.00:I<<BR>>'''Functional connectivity in fMRI'''<<BR>>Petar Raykov <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#connectivityfmri|materials]] [[https://www.youtube.com/watch?v=1VOKsWWLgjk|video]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''Effective Connectivity for fMRI (DCM)''' <<BR>> Rik Henson & Pranay Yadav<<BR>>[[attachment:CBU-Neuroimaging-Training-DCM-fMRI-demo-slides.pdf|DCM fMRI demo slides]], [[attachment:CBU-Neuroimaging-Training-DCM-PEB-demo-slides.pdf|DCM PEB demo slides]], [[https://youtu.be/1VOKsWWLgjk|video]], [[attachment:CBU-Neuroimaging-Training-DCM-fMRI.pdf|document]] ||
||<style="text-align:center;vertical-align:middle">'''Mar 4''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Effective Connectivity for MEG/EEG (DCM)''' <<BR>> Pranay Yadav & Rik Henson <<BR>> [[attachment:CBU-Neuroimaging-Training-DCM-MEEG-demo-slides.pdf|DCM MEEG demo slides]], [[attachment:CBU-Neuroimaging-Training-DCM-PEB-demo-slides.pdf|DCM PEB demo slides]], [[https://www.youtube.com/watch?v=HNaAvKmVCYo|video]], [[attachment:CBU-Neuroimaging-Training-DCM-MEEG.pdf|document]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 23''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1_5Feb24.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2_5Feb24.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 24''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_5Feb24.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mar 10''' ||<45% style="text-align:center;text-align:center">10.12.00:<<BR>> '''Graph Theory''' <<BR>> Isaac Sebenius<<BR>> [[attachment:COGNESTIC23-presentation_Sebenius.pdf|slides]]<<BR>> ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2022#rsa1|materials for The Decoding Toolbox]] <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#rsa2|materials for the RSA Toolbox]] [[attachment:INM24_MVPA_djm.pptx|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Mar 11''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Brain Stimulation''' <<BR>> Elizabeth Michael <<BR>> previous [[attachment:IntroToTMS_JJ_2022.pdf|slides]] [[attachment:IntroToTMS_JJ_2022.mov|video]] ||<45% style="text-align:center;text-align:center"> ||		 ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Mar 2''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell <<BR>> [[attachment:INM25_MVPA_djm.pptx|Slides]] ||<45% style="text-align:center;text-align:center">14-16:00:''' '''<<BR>>'''Multivariate EEG/MEG Analyses: Decoding, Representational Similarity Analysis, Temporal Response Functions '''<<BR>>''' '''Máté Aller <<BR>> [[attachment:CBUImaging26_EEG_MEG_Decoding_RSA_TRF_MAller.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Mar 3''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> [[https://www.jachterberg.com/cbu_methods|Materials]] ||<45% style="text-align:center;text-align:center"> ||
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||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mar 17''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> ||<45% style="text-align:center;text-align:center"> || ||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Mar 9''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Online Testing: What's Available and How to Use It Effectively''' <<BR>> Adam Attaheri [[attachment:Attaheri_online_testing_lecture_2025.pdf|PDF]] [[attachment:Adam_25Feb25.zip|materials]] ||<45% style="text-align:center;text-align:center">14-16:00:''' '''<<BR>>'''Multisensory stimulus presentation and movement tracking during neuroimaging '''<<BR>>''' '''Celia Foster [[attachment:Foster_MultimodalStimulusPresentation.pdf|PDF]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Mar 10''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Brain Stimulation''' <<BR>> Elizabeth Michael <<BR>> previous [[attachment:IntroToTMS_JJ_2022.pdf|slides]] [[attachment:IntroToTMS_JJ_2022.mov|video]] ||

Introduction To Neuroimaging Methods

We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2026. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to everyone.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe (a t) mrc-cbu.cam.ac.uk.

The links to slides and other documents below are from previous year's lectures, and may be updated in due course.

Look here for other training opportunities in and around Cambridge.

Please contact OlafHauk with questions and feedback.


Mon
Jan 12

---

14-16.00:
The use of neuroimaging in cognitive neuroscience
Rik Henson
PDF

Tue
Jan 13

---

14-16.00:
Statistics for neuroimaging data
Rik Henson
[GitHub]


Mon
Jan 19

10-12.00:
A Field Day - Some Physics You May Find Useful
Olaf Hauk
PDF

14-16.00:
Brain Anatomy for Cognitive Neuroscientists
Moataz Assem
Online!
PDF

Tue
Jan 20

---


Mon
Jan 26

10-12.00:
Introduction to MRI Physics
Marta Correia
Slides

14-16.00:
Biophysics of fMRI and the BOLD signal
Marta Correia
Slides

Tue
Jan 27

10-12.00:
Structural MRI
Marta Correia
Freesurfer VBM


Mon
Feb 2

10-12:00:
Introduction to diffusion MRI
Marta Correia
Slides_lecture Slides_preprocessing

14-16.00:
Advanced Diffusion MRI
Marta Correia
Slides_lecture Slides_TBSS

Tue
Feb 3

10-12.00:
PET imaging
Maura Malpetti


Mon
Feb 9

10-12:00:
fMRI: Introduction, Experimental design & Data
Dace Apšvalka
materials

14-16:00:
fMRI: Pre-processing & Analysis
Dace Apšvalka
materials

Tue
Feb 10

10-12:00:
fMRI: Practical demo
Dace Apšvalka
materials


Mon
Feb 16

10-12.00:
Functional connectivity in fMRI
Petar Raykov
materials video

14-16.00:
Effective Connectivity
Rik Henson
slides

Tue
Feb 17

10-12.00:
Brain Network Analysis
Kayson Fakhar


Mon
Feb 23

10-12.00:
EEG/MEG I – Overview and pre-processing
Olaf Hauk
Jupyter notebook, slides, video

14-16.00:
EEG/MEG II – Head modelling and source estimation
Olaf Hauk
Jupyter notebook, slides, video

Tue
Feb 24

10-12:00:
EEG/MEG III – Time-frequency analysis and functional connectivity
Olaf Hauk
Jupyter notebook, slides, video


Mon
Mar 2

10-12.00:
MVPA and RSA
Daniel Mitchell
Slides

14-16:00:
Multivariate EEG/MEG Analyses: Decoding, Representational Similarity Analysis, Temporal Response Functions
Máté Aller
Slides

Tue
Mar 3

10-12.00:
Neural Network Modelling
Jascha Achterberg
Materials


Mon
Mar 9

10-12:00:
Online Testing: What's Available and How to Use It Effectively
Adam Attaheri PDF materials

14-16:00:
Multisensory stimulus presentation and movement tracking during neuroimaging
Celia Foster PDF

Tue
Mar 10

10-12.00:
Brain Stimulation
Elizabeth Michael
previous slides video

None: IntroductionNeuroimagingLectures (last edited 2026-03-09 11:53:28 by CeliaFoster)