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= Lectures and Workshops "Introduction to Neuroimaging Methods" =
Lectures and workshops will take place on Wednesdays, 14.30, either in the CBU West Wing Seminar Room or Lecture Theatre (see below).
||Jan 15 ||14.30 ||A field day: Some physics you may find useful ||Olaf Hauk||Lecture ||45 min ||
||Jan 22||14.30||EEG/MEG 1: Basics and pre-processing||Olaf Hauk||Lecture||45 min||
= Introduction To Neuroimaging Methods =
We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2026. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to [[mailto:skillstraining-subscribe@mrc-cbu.cam.ac.uk|skillstraining-subscribe (a t) mrc-cbu.cam.ac.uk]].

The links to slides and other documents below are from previous year's lectures, and may be updated in due course.

Look here for other [[education|training opportunities in and around Cambridge]].

Please contact OlafHauk with questions and feedback

'''The below schedule is still from the previous year - please bear with us as we prepare next year's programme.'''

<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>> '''Jan 19''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>>'''A Field Day - Some Physics You May Find Useful''' <<BR>> Olaf Hauk<<BR>>[[attachment:Olaf Some Physics 9Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>>'''Brain Anatomy for Cognitive Neuroscientists''' <<BR>>Moataz Assem <<BR>>[[attachment:Assem_CBU_anatomy_lecture_Jan2025.pdf|PDF]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>''' Jan 20''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to Statistics in Neuroimaging''' <<BR>> Rik Henson<<BR>> ||<45% style="text-align:center;text-align:center"> ||
Line 7: Line 19:


<<BR>>
||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>> '''Jan 26''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2024.pdf|Slides]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2024.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>> '''Jan 27''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Structural MRI'''<<BR>> Marta Correia <<BR>> [[attachment:Freesurfer_2025.pdf|Freesurfer]] [[attachment:FSL_VBM_2025.pdf|VBM]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 2''' ||<45% style="text-align:center;text-align:center">10-12:00:<<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part1.pdf|Slides_preprocessing]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part2.pdf|Slides_TBSS]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 3''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''PET imaging'''<<BR>> Maura Malpetti <<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 9''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI: Introduction, Experimental design & Data ''' <<BR>> Dace Apšvalka <<BR>>[[https://github.com/dcdace/fMRI_training|materials]] <<BR>> ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI:''' '''Pre-processing & Analysis'''<<BR>> Dace Apšvalka<<BR>> [[https://github.com/dcdace/fMRI_training|materials]]<<BR>> ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 10''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI:''' '''Practical demo '''<<BR>> Dace Apšvalka<<BR>> [[https://github.com/dcdace/fMRI_training|materials]]<<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 16''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Functional connectivity in fMRI'''<<BR>>Petar Raykov <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#connectivityfmri|materials]] [[https://www.youtube.com/watch?v=1VOKsWWLgjk|video]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>> '''Effective Connectivity''' <<BR>> Rik Henson <<BR>> [[attachment:CBUTraining_Henson_Connectivity.pdf|slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 17''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Network Analysis''' <<BR>> Kayson Fakhar ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Feb 23''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1_5Feb24.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2_5Feb24.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Feb 24''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_5Feb24.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Mar 2''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell <<BR>> [[attachment:INM25_MVPA_djm.pptx|Slides]] ||<45% style="text-align:center;text-align:center">14-16:00:''' '''<<BR>>'''MVAP/RSA and TRFs for EEG/MEG analysis '''<<BR>>''' '''Máté Aller ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Mar 3''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> [[https://www.jachterberg.com/cbu_methods|Materials]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon'''<<BR>>'''Mar 9''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''Online Testing: What's Available and How to Use It Effectively''' <<BR>> Adam Attaheri [[attachment:Attaheri_online_testing_lecture_2025.pdf|PDF]] [[attachment:Adam_25Feb25.zip|materials]] ||<45% style="text-align:center;text-align:center">14-16:00:''' '''<<BR>>'''Multisensory stimulus presentation and movement tracking during neuroimaging '''<<BR>>''' '''Celia Foster ||
||<style="text-align:center;vertical-align:middle">'''Tue'''<<BR>>'''Mar 10''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Brain Stimulation''' <<BR>> Elizabeth Michael <<BR>> previous [[attachment:IntroToTMS_JJ_2022.pdf|slides]] [[attachment:IntroToTMS_JJ_2022.mov|video]] ||




----

Introduction To Neuroimaging Methods

We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2026. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe (a t) mrc-cbu.cam.ac.uk.

The links to slides and other documents below are from previous year's lectures, and may be updated in due course.

Look here for other training opportunities in and around Cambridge.

Please contact OlafHauk with questions and feedback

The below schedule is still from the previous year - please bear with us as we prepare next year's programme.


Mon
Jan 19

10-12.00:
A Field Day - Some Physics You May Find Useful
Olaf Hauk
PDF

14-16.00:
Brain Anatomy for Cognitive Neuroscientists
Moataz Assem
PDF

Tue
Jan 20

10-12.00:
Introduction to Statistics in Neuroimaging
Rik Henson


Mon
Jan 26

10-12.00:
MRI Physics I
Marta Correia
Slides

14-16.00:
MRI Physics II
Marta Correia
Slides

Tue
Jan 27

10-12.00:
Structural MRI
Marta Correia
Freesurfer VBM


Mon
Feb 2

10-12:00:
Introduction to diffusion MRI
Marta Correia
Slides_lecture Slides_preprocessing

14-16.00:
Advanced Diffusion MRI
Marta Correia
Slides_lecture Slides_TBSS

Tue
Feb 3

10-12.00:
PET imaging
Maura Malpetti


Mon
Feb 9

10-12:00:
fMRI: Introduction, Experimental design & Data
Dace Apšvalka
materials

14-16:00:
fMRI: Pre-processing & Analysis
Dace Apšvalka
materials

Tue
Feb 10

10-12:00:
fMRI: Practical demo
Dace Apšvalka
materials


Mon
Feb 16

10-12.00:
Functional connectivity in fMRI
Petar Raykov
materials video

14-16.00:
Effective Connectivity
Rik Henson
slides

Tue
Feb 17

10-12.00:
Brain Network Analysis
Kayson Fakhar


Mon
Feb 23

10-12.00:
EEG/MEG I – Overview and pre-processing
Olaf Hauk
Jupyter notebook, slides, video

14-16.00:
EEG/MEG II – Head modelling and source estimation
Olaf Hauk
Jupyter notebook, slides, video

Tue
Feb 24

10-12:00:
EEG/MEG III – Time-frequency analysis and functional connectivity
Olaf Hauk
Jupyter notebook, slides, video


Mon
Mar 2

10-12.00:
MVPA and RSA
Daniel Mitchell
Slides

14-16:00:
MVAP/RSA and TRFs for EEG/MEG analysis
Máté Aller

Tue
Mar 3

10-12.00:
Neural Network Modelling
Jascha Achterberg
Materials


Mon
Mar 9

10-12:00:
Online Testing: What's Available and How to Use It Effectively
Adam Attaheri PDF materials

14-16:00:
Multisensory stimulus presentation and movement tracking during neuroimaging
Celia Foster

Tue
Mar 10

10-12.00:
Brain Stimulation
Elizabeth Michael
previous slides video


None: IntroductionNeuroimagingLectures (last edited 2026-03-09 11:53:28 by CeliaFoster)