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= Lectures and Workshops "Introduction to Neuroimaging Methods" =
Lectures and workshops will take place on Wednesdays, 14.30, either in the CBU West Wing Seminar Room or Lecture Theatre (see below).
||Jan 15 ||14.30 ||A field day: Some physics you may find useful ||Olaf Hauk||Lecture ||45 min ||
||Jan 22||14.30||EEG/MEG 1: Basics and pre-processing||Olaf Hauk||Lecture||45 min||		 = Introduction To Neuroimaging Methods =
We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2025. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk .

The links to slides and other documents below are from previous year's lectures, and may be updated in due course.

Look here for other [[education|training opportunities in and around Cambridge]].

Please contact OlafHauk with questions and feedback

<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mon''' (!) '''Jan 20''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''A Field Day - Some Physics You May Find Useful''' <<BR>> Olaf Hauk<<BR>>[[attachment:Olaf Some Physics 9Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Introduction to Statistics in Neuroimaging''' <<BR>> Rik Henson<<BR>> ||
||<style="text-align:center;vertical-align:middle">'''Tue Jan 21''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Anatomy for Cognitive Neuroscientists'''<<BR>> Moataz Assem [[attachment:Assem_anatomy_lecture_15Jan24.pdf|PDF]] ||<45% style="text-align:center;text-align:center"> ||
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<<BR>>
||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Mon''' '''Jan 27''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MRI Physics I''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsI_IntroToNeuroImaging2024.pdf|Slides]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''MRI Physics II''' <<BR>> Marta Correia<<BR>> [[attachment:MRPhysicsII_IntroToNeuroImaging2024.pdf|Slides]] ||
||<style="text-align:center;vertical-align:middle">'''Tue''' '''Jan 28''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Structural MRI'''<<BR>> Marta Correia 10-12.00: <<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%" tablestyle="text-align:center"style="text-align:center;vertical-align:middle">'''Feb 3''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''Introduction to diffusion MRI''' <<BR>> Marta Correia<<BR>> [[attachment:IntroductionToDiffusionMRI_Part1_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part1.pdf|Slides_preprocessing]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''Advanced Diffusion MRI ''' <<BR>> Marta Correia <<BR>> [[attachment:IntroductionToDiffusionMRI_Part2_2024.pdf|Slides_lecture]] [[attachment:FSL_DTI&TBSS_Part2.pdf|Slides_TBSS]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 4''' ||<45% style="text-align:center;text-align:center">10-12:00:<<BR>> '''PET imaging'''<<BR>> Maura Malpetti <<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Term break''' ||<45% style="text-align:center;text-align:center"> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 17''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI: Introduction, Experimental design & Data ''' <<BR>> Dace Apšvalka <<BR>> [[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center">14-16:00: <<BR>> '''fMRI:''' '''Pre-processing & Analysis'''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||
||<style="text-align:center;vertical-align:middle">'''Feb 18''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''fMRI:''' '''Practical demo '''<<BR>> Dace Apšvalka<<BR>>[[https://github.com/dcdace/fMRI_training/|materials]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Feb 24''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''EEG/MEG I – Overview and pre-processing''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG1_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG1_5Feb24.pdf|slides]], [[attachment:EEGMEG1.mp4|video]] ||<45% style="text-align:center;text-align:center">14-16.00: <<BR>> '''EEG/MEG II – Head modelling and source estimation''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG2_24Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG2_5Feb24.pdf|slides]], [[attachment:EEGMEG2_SourceEstimation.mp4|video]] ||
||<10% style="text-align:center;vertical-align:middle">'''Feb 25''' ||<45% style="text-align:center;text-align:center">10-12:00: <<BR>> '''EEG/MEG III – Time-frequency analysis and functional connectivity''' <<BR>> Olaf Hauk <<BR>>[[attachment:EEGMEG3_25Jan22.ipynb|Jupyter notebook]], [[attachment:Olaf EEGMEG3_5Feb24.pdf|slides]], [[attachment:EEGMEG3.mp4|video]] ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mar 3''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>>'''Functional connectivity in fMRI'''<<BR>>Petar Raykov <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#connectivityfmri|materials]] [[https://www.youtube.com/watch?v=1VOKsWWLgjk|video]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>> '''Effective Connectivity''' <<BR>> Rik Henson <<BR>> [[attachment:CBUTraining_Henson_Connectivity.pptx|slides]] ||
||<style="text-align:center;vertical-align:middle">'''Mar 4''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Brain Network Analysis''' <<BR>> Rik Henson ||<45% style="text-align:center;text-align:center"> ||




<<BR>>
||<tablewidth="100%"style="text-align:center;vertical-align:middle">'''Mar 10''' ||<45% style="text-align:center;text-align:center">10-12.00: <<BR>> '''MVPA and RSA''' <<BR>> Daniel Mitchell <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2022#rsa1|materials for The Decoding Toolbox]] <<BR>> [[https://imaging.mrc-cbu.cam.ac.uk/methods/COGNESTIC2023#rsa2|materials for the RSA Toolbox]] [[attachment:INM24_MVPA_djm.pptx|Slides]] ||<45% style="text-align:center;text-align:center">14-16.00:<<BR>>'''Brain Stimulation''' <<BR>> Elizabeth Michael <<BR>> previous [[attachment:IntroToTMS_JJ_2022.pdf|slides]] [[attachment:IntroToTMS_JJ_2022.mov|video]] ||
||<style="text-align:center;vertical-align:middle">'''Mar 11''' ||<45% style="text-align:center;text-align:center">10-12.00:<<BR>> '''Neural Network Modelling '''<<BR>> Jascha Achterberg <<BR>> ||<45% style="text-align:center;text-align:center"> ||




<<BR>>

----

Introduction To Neuroimaging Methods

We are offering introductory lectures on neuroimaging data analysis as well as brain stimulation Lent Term 2025. These events will happen in person in the CBU Lecture Theatre on Mondays and Tuesdays and will take 1-2 hours. They are free and open to all researchers from Cambridge.

Details will be announced before individual events via our skillstraining mailing list. To subscribe, please send an e-mail to skillstraining-subscribe@mrc-cbu.cam.ac.uk .

The links to slides and other documents below are from previous year's lectures, and may be updated in due course.

Look here for other training opportunities in and around Cambridge.

Please contact OlafHauk with questions and feedback


Mon (!) Jan 20

10-12.00:
A Field Day - Some Physics You May Find Useful
Olaf Hauk
PDF

14-16.00:
Introduction to Statistics in Neuroimaging
Rik Henson

Tue Jan 21

10-12.00:
Brain Anatomy for Cognitive Neuroscientists
Moataz Assem PDF


Mon Jan 27

10-12.00:
MRI Physics I
Marta Correia
Slides

14-16.00:
MRI Physics II
Marta Correia
Slides

Tue Jan 28

10-12.00:
Structural MRI
Marta Correia 10-12.00:


Feb 3

10-12.00:
Introduction to diffusion MRI
Marta Correia
Slides_lecture Slides_preprocessing

14-16.00:
Advanced Diffusion MRI
Marta Correia
Slides_lecture Slides_TBSS

Feb 4

10-12:00:
PET imaging
Maura Malpetti


Term break


Feb 17

10-12:00:
fMRI: Introduction, Experimental design & Data
Dace Apšvalka
materials

14-16:00:
fMRI: Pre-processing & Analysis
Dace Apšvalka
materials

Feb 18

10-12:00:
fMRI: Practical demo
Dace Apšvalka
materials


Feb 24

10-12.00:
EEG/MEG I – Overview and pre-processing
Olaf Hauk
Jupyter notebook, slides, video

14-16.00:
EEG/MEG II – Head modelling and source estimation
Olaf Hauk
Jupyter notebook, slides, video

Feb 25

10-12:00:
EEG/MEG III – Time-frequency analysis and functional connectivity
Olaf Hauk
Jupyter notebook, slides, video


Mar 3

10-12.00:
Functional connectivity in fMRI
Petar Raykov
materials video

14-16.00:
Effective Connectivity
Rik Henson
slides

Mar 4

10-12.00:
Brain Network Analysis
Rik Henson


Mar 10

10-12.00:
MVPA and RSA
Daniel Mitchell
materials for The Decoding Toolbox
materials for the RSA Toolbox Slides

14-16.00:
Brain Stimulation
Elizabeth Michael
previous slides video

Mar 11

10-12.00:
Neural Network Modelling
Jascha Achterberg


None: IntroductionNeuroimagingLectures (last edited 2026-03-09 11:53:28 by CeliaFoster)