|
Size: 11842
Comment:
|
Size: 12012
Comment:
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 6: | Line 6: |
| ||<10%>__Websites__ || [[https://osf.io/|OSF]] <<BR>> [[https://www.ukrn.org/primers/|UKRN]] <<BR>> [[https://bids.neuroimaging.io/|BIDS]]|| | ||<10%>__Websites__ ||[[https://osf.io/|OSF]] <<BR>> [[https://www.ukrn.org/primers/|UKRN]] <<BR>> [[https://bids.neuroimaging.io/|BIDS]] || |
| Line 25: | Line 25: |
| ||<10%>__Software__ || || | ||<10%>__Software__ ||[[https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/|FSL]] [[https://www.mrtrix.org/|MRtrix3]]|| |
| Line 35: | Line 35: |
| ||<10%>__Software__ || || | ||<10%>__Software__ ||[[https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/|FSL]] [[https://www.mrtrix.org/|MRtrix3]]|| |
| Line 87: | Line 87: |
| ||__Suggested reading__ ||[[http://dx.doi.org/10.1016/j.tics.2013.09.016|Resting-state functional Connectivity]] <<BR>> [[https://doi.org/10.1016/j.neuroimage.2013.07.008|Simple Intro to DCM]] <<BR>> [[https://www.frontiersin.org/articles/10.3389/fnins.2019.00300/full#supplementary-material|fMRI preprocessing in SPM12 (for demo)]] <<BR>> [[https://www.fil.ion.ucl.ac.uk/spm/doc/spm12_manual.pdf|SPM12 manual (Chapter 36)]]|| | ||__Suggested reading__ ||[[http://dx.doi.org/10.1016/j.tics.2013.09.016|Resting-state functional Connectivity]] <<BR>> [[https://doi.org/10.1016/j.neuroimage.2013.07.008|Simple Intro to DCM]] <<BR>> [[https://www.frontiersin.org/articles/10.3389/fnins.2019.00300/full#supplementary-material|fMRI preprocessing in SPM12 (for demo)]] <<BR>> [[https://www.fil.ion.ucl.ac.uk/spm/doc/spm12_manual.pdf|SPM12 manual (Chapter 36)]] || |
| Line 189: | Line 189: |
Course Material for COGNESTIC 2022
The Cognitive Neuroscience Skills Training In Cambridge (COGNESTIC) is a 2-week course that provides researchers with training in state-of-the-art methods for neuroimaging and neurostimulation. You can find more information on the COGNESTIC webpage.
Below you will find documents, videos and web links that will be used for the course or can be used for preparation.
Introduction and Open Science |
||
Websites |
||
Suggested reading |
Munafo et al, 2017, problems in science |
|
Suggested viewing |
Comedian's Perspective on science and media |
|
Structural MRI |
||
Software |
||
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
||
fMRI I |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
fMRI II |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
fMRI III |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
fMRI IV |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
Connectivity for fMRI |
||
Software |
||
Datasets |
||
Suggested reading |
Resting-state functional Connectivity |
|
Suggested viewing |
fMRI Functional Connectivity, including DCM |
|
Eye-tracking |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
EEG/MEG I – Pre-processing |
||
Software |
MNE-Pythonneuro |
|
Datasets |
Sample dataset in MNE-Python. Tutorials |
|
Suggested reading |
||
Suggested viewing |
||
EEG/MEG II – Source Estimation |
||
Software |
||
Datasets |
Sample dataset in MNE-Python. Tutorials |
|
Suggested reading |
||
Suggested viewing |
||
EEG/MEG III – Time-Frequency and Functional Connectivity |
||
Software |
||
Datasets |
Sample dataset in MNE-Python. Tutorials |
|
Suggested reading |
Tutorial on Functional Connectivity |
|
Suggested viewing |
Time-frequency and functional connectivity analysis |
|
Graph Theory |
||
Software |
||
Datasets |
||
Suggested reading |
Complex brain networks: graph theoretical analysis of structural and functional systems |
|
Suggested viewing |
||
MVPA/RSA I |
||
Software |
||
Datasets |
The Decoding Toolbox example dataset |
|
Suggested reading |
Mur et al. (2009) Revealing representational content with pattern-information fMRI--an introductory guide |
|
Suggested viewing |
Excellent presentations from Martin Hebart's MVPA course, on: |
|
MVPA/RSA II |
||
Software |
The RSA toolbox in Matlab |
|
Datasets |
|
|
Suggested reading |
Kriegeskorte et al. (2008) Representational similarity analysis - connecting the branches of systems neuroscience |
|
Suggested viewing |
||
Statistics in R |
||
Software |
||
Datasets |
||
Suggested reading |
Statistical Methods for Psychology (Howell) |
|
Suggested viewing |
||
Brain Stimulation |
||
Software |
|
|
Datasets |
|
|
Suggested reading |
|
|
Suggested viewing |
|
|
DCM for M/EEG |
||
Software |
||
Datasets |
||
Suggested reading |
||
Suggested viewing |
Talk on DCM for M/EEG coming soon |
|