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||'''[http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis SPM]''' ||'''[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData/MNE_overview MNE]''' ||'''[http://fieldtrip.fcdonders.nl/ Fieldtrip]''', '''[http://imaging.mrc-cbu.cam.ac.uk/imaging/FieldtripAnalysis Fieldtrip at CBU]''' ||
||developed at the [http://www.fil.ion.ucl.ac.uk/spm/ FIL] and at the [http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis CBU]. ||developed at [http://www.nmr.mgh.harvard.edu/martinos/userInfo/data/sofMNE.php MGH] ||developed at the [http://www.ru.nl/neuroimaging/ Donders centre]. ||
For some more details look [http://imaging.mrc-cbu.cam.ac.uk/meg/FreewarePackages here]. For an introduction and overview to different analysis approaches see our [http://imaging.mrc-cbu.cam.ac.uk/meg/MEGday29Jan10 "MEG day" presentations].
||'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis|SPM]]''' ||'''[[http://imaging.mrc-cbu.cam.ac.uk/meg/AnalyzingData/MNE_overview|MNE]]''' ||'''[[http://fieldtrip.fcdonders.nl/|Fieldtrip]]''', '''[[http://imaging.mrc-cbu.cam.ac.uk/imaging/FieldtripAnalysis|Fieldtrip at CBU]]''' ||
||developed at the [[http://www.fil.ion.ucl.ac.uk/spm/|FIL]] and at the [[http://imaging.mrc-cbu.cam.ac.uk/meg/SpmAnalysis|CBU]]. ||developed at [[http://www.nmr.mgh.harvard.edu/martinos/userInfo/data/sofMNE.php|MGH]] ||developed at the [[http://www.ru.nl/neuroimaging/|Donders centre]]. ||
For some more details look [[http://imaging.mrc-cbu.cam.ac.uk/meg/FreewarePackages|here]]. For an introduction and overview to different analysis approaches see our [[http://imaging.mrc-cbu.cam.ac.uk/meg/MEGday29Jan10|"MEG day" presentations]].
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||'''[http://sccn.ucsd.edu/eeglab EEGLAB]''' ||'''[http://nutmeg.berkeley.edu NUTMEG]''' || ||'''[[http://sccn.ucsd.edu/eeglab|EEGLAB]]''' ||'''[[http://nutmeg.berkeley.edu|NUTMEG]]''' ||
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||[http://www.neuroscan.com/curry.cfm CURRY] || [http://www.besa.de/ BESA] || [http://www.ant-neuro.com/products/asa ASA] || [http://www.sourcesignal.com/ EMSE] || [http://www.brainproducts.com/productdetails.php?id=17 BrainVision Analyzer ] || ||[[http://www.neuroscan.com/curry.cfm|CURRY]] || [[http://www.besa.de/|BESA]] || [[http://www.ant-neuro.com/products/asa|ASA]] || [[http://www.sourcesignal.com/|EMSE]] || [[http://www.brainproducts.com/productdetails.php?id=17|BrainVision Analyzer ]] ||
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The [http://imaging.mrc-cbu.cam.ac.uk/meg/NeuromagSoftware Neuromag software] is part of the [http://www.elekta.com/healthcare_international_elekta_neuromag.php Elekta Neuromag MEG system] ([http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription Vectorview configuration]). You can get a general idea about the analysis pathway from the [attachment:MEGAnalysisLectureJan07CBU.pdf CBU introductory lecture into MEG analysis] (the slides do not include the live software demos given at the lecture). The [[http://imaging.mrc-cbu.cam.ac.uk/meg/NeuromagSoftware|Neuromag software]] is part of the [[http://www.elekta.com/healthcare_international_elekta_neuromag.php|Elekta Neuromag MEG system]] ([[http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription|Vectorview configuration]]). You can get a general idea about the analysis pathway from the [[attachment:MEGAnalysisLectureJan07CBU.pdf|CBU introductory lecture into MEG analysis]] (the slides do not include the live software demos given at the lecture).
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[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter MaxFilter] is an essential pre-processing tool for MEG data, in order to remove noise sources likely to originate from outside the sensor array. [[http://imaging.mrc-cbu.cam.ac.uk/meg/Maxfilter|MaxFilter]] is an essential pre-processing tool for MEG data, in order to remove noise sources likely to originate from outside the sensor array.
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[http://imaging.mrc-cbu.cam.ac.uk/meg/preprocessing Pre-processing pages] [[http://imaging.mrc-cbu.cam.ac.uk/meg/preprocessing|Pre-processing pages]]
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...you should start on our [http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners Beginners' Pages], with links to tutorials and more information on Matlab, Linux, Python etc. ...you should start on our [[http://imaging.mrc-cbu.cam.ac.uk/meg/Beginners|Beginners' Pages]], with links to tutorials and more information on Matlab, Linux, Python etc.
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Here you can find [http://imaging.mrc-cbu.cam.ac.uk/meg/MEGpapers a list of papers] and [http://imaging.mrc-cbu.cam.ac.uk/meg/MailingLists of mailing lists, web-sites and events] for various MEG-related topics. Here you can find [[http://imaging.mrc-cbu.cam.ac.uk/meg/MEGpapers|a list of papers]] and [[http://imaging.mrc-cbu.cam.ac.uk/meg/MailingLists|of mailing lists, web-sites and events]] for various MEG-related topics.

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Analysing data

There are several options for analysing MEG and EEG data from the Neuromag machine at the CBU:

FreewarePackages

These are the most intensively used freeware software packages for EEG/MEG analysis at the CBU:

SPM

MNE

Fieldtrip, Fieldtrip at CBU

developed at the FIL and at the CBU.

developed at MGH

developed at the Donders centre.

For some more details look here. For an introduction and overview to different analysis approaches see our "MEG day" presentations.

Other options are:

EEGLAB

NUTMEG

Matlab toolbox for EEG analysis (incl. ICA)

MEG/EEG analysis toolbox in conjunction with SPM8

CommercialPackages

We've got one or more licenses for the following software packages:

CURRY

BESA

ASA

EMSE

BrainVision Analyzer

Neuromag Software

The Neuromag software is part of the Elekta Neuromag MEG system (Vectorview configuration). You can get a general idea about the analysis pathway from the CBU introductory lecture into MEG analysis (the slides do not include the live software demos given at the lecture).

MaxFilter

MaxFilter is an essential pre-processing tool for MEG data, in order to remove noise sources likely to originate from outside the sensor array.

More info on pre-processing (e.g. trigger coding)

Pre-processing pages

If all this is new to you...

...you should start on our Beginners' Pages, with links to tutorials and more information on Matlab, Linux, Python etc.

Literature, Mailing Lists, Web-Sites and Events around MEG

Here you can find a list of papers and of mailing lists, web-sites and events for various MEG-related topics.

CbuMeg: AnalyzingData (last edited 2013-03-08 10:02:25 by localhost)