⇤ ← Revision 1 as of 2010-06-09 13:50:24
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Size: 436
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This is what you should look out for (rare in our data: | This is what you should look out for (rare in our data): |
Check intensity normalisation
With the following command you can check whether white matter was segmented correctly:
tkmedit <mysubjectname> brainmask.mgz lh.white -aux T1.mgz -aux-surface rh.white
This is what you should look out for (rare in our data):
attachment:checkintensity.jpg
See the [http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/ControlPoints Freesurfer Wiki] on how to fix such a problem.