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tkregister2 --mgz --s Subject3 -fstal | Use the command : '''tkregister2 --mgz --s <mysubjectname> -fstal''' to compare your MRI with a Talairach template. You will see something like this: |
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Switch between "TARGET" and "MOVEABLE" (bottom middle of display) to switch between the two views. You can use the scaling, translation and rotation functions to improve the match between your MRI and the template. However, very few (if any) images will need editing at this stage. If you do change something, use "SAVE REG" (top left) to save the result. You will then have to run the previous autorecon1 step again. |
Checking Talairach transform after autorecon1
Use the command
: tkregister2 --mgz --s <mysubjectname> -fstal
to compare your MRI with a Talairach template. You will see something like this:
attachment:checktalairach.jpg
Switch between "TARGET" and "MOVEABLE" (bottom middle of display) to switch between the two views. You can use the scaling, translation and rotation functions to improve the match between your MRI and the template. However, very few (if any) images will need editing at this stage. If you do change something, use "SAVE REG" (top left) to save the result. You will then have to run the previous autorecon1 step again.