Second Level Analysis: Multiple Comparisons, SVC, ROI analysisBR

You can download a copy of Nadja and Ben's talks here: attachment:SecondLevel.ppt attachment:ROIAnalysis.pptx BR

Web ResourcesBR

Below is a list of web resources used in the talk BRBR [http://fmri.wfubmc.edu/downloads/WFU_PickAtlas_User_Manual.pdf PickAtlas]BR [http://www.fil.ion.ucl.ac.uk/spm/ UCL's Pages]BRBR

Multiple SubjectsBRBR [http://mindhive.mit.edu/node/92 RFX and FFX on The MIT Wiki]BR [http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/pdfs/Ch12.pdf Penny and Holmes(2003)]BRBR ROI AnalysisBRBR

[http://mindhive.mit.edu/node/101 ROI FAQ on The MIT Wiki]BR [http://marsbar.sourceforge.net/index.html MarsBaR]BR [http://imaging.mrc-cbu.cam.ac.uk/imaging/MniTalairach tal2mni & mni2tal scripts]BR

ReferencesBRBR Random Field TheoryBR attachment:Brett2003.pdf Brett et al., (2003) An Introduction to Random Field TheoryBR attachment:Worsley2003.pdf Worsley et al., (2003) Developments in Random Field Theory

ROI AnalysisBR

Friston, K. J., Rotshtein, P., Geng, J. J., Sterzer, P., & Henson, R. N. (2006). A critique of functional localisers. Neuroimage, 30(4), 1077-87. BR

• [http://www.ncbi.nlm.nih.gov/pubmed/16635579 PMID: 16635579]BR

Saxe, R., Brett, M., & Kanwisher, N. (2006). Divide and conquer: a defense of functional localizers. Neuroimage, 30(4), 1088-96; discussion 1097-9.BR

• [http://www.ncbi.nlm.nih.gov/pubmed/16635578 PMID: 16635578]BR

Poldrack, R. a, & Mumford, J. a. (2009). Independence in ROI analysis: where is the voodoo? Social cognitive and affective neuroscience, 4(2), 208-13.BR

• attachment:IndependenceROI.pdf BRBR

Begging the Question: The Non-Independence Error in fMRI Data Analysis, Edward Vul, Nancy KanwisherBR

• attachment:VulKanwisher.pdfBR

Nieto-Castanon, A., Ghosh, S. S., Tourville, J. a, & Guenther, F. H. (2003). Region of interest based analysis of functional imaging data. Neuroimage, 19(4), 1303-1316. BR

• DOI: 10.1016/S1053-8119(03)00188-5BR

Poldrack, R. A., (2007) Region of Interest Analysis for fMRI. SCAN, (2) 67-70BR

• attachment:PoldrackROIAnalysis.pdfBR

Kawabata, Devlin (2011) Improving the reliability of functional localizers. Neuroimage BR

• [http://www.ncbi.nlm.nih.gov/pubmed/21600292 PMID: 21600292]