<?xml version="1.0" encoding="utf-8"?><!DOCTYPE article  PUBLIC '-//OASIS//DTD DocBook XML V4.4//EN'  'http://www.docbook.org/xml/4.4/docbookx.dtd'><article><articleinfo><title>PrinciplesRandomEffects</title><revhistory><revision><revnumber>12</revnumber><date>2017-01-06 12:03:41</date><authorinitials>OlafHauk</authorinitials></revision><revision><revnumber>11</revnumber><date>2017-01-06 12:00:39</date><authorinitials>OlafHauk</authorinitials></revision><revision><revnumber>10</revnumber><date>2017-01-06 11:59:46</date><authorinitials>ClareCook</authorinitials></revision><revision><revnumber>9</revnumber><date>2017-01-06 11:57:27</date><authorinitials>ClareCook</authorinitials></revision><revision><revnumber>8</revnumber><date>2017-01-06 11:48:39</date><authorinitials>ClareCook</authorinitials></revision><revision><revnumber>7</revnumber><date>2013-03-07 21:23:01</date><authorinitials>localhost</authorinitials><revremark>converted to 1.6 markup</revremark></revision><revision><revnumber>6</revnumber><date>2013-02-04 15:01:35</date><authorinitials>OlafHauk</authorinitials></revision><revision><revnumber>5</revnumber><date>2006-10-01 13:51:54</date><authorinitials>IanNimmoSmith</authorinitials></revision><revision><revnumber>4</revnumber><date>2006-08-16 11:40:14</date><authorinitials>RhodriCusack</authorinitials></revision><revision><revnumber>3</revnumber><date>2006-08-16 11:21:30</date><authorinitials>RhodriCusack</authorinitials></revision><revision><revnumber>2</revnumber><date>2006-08-16 11:17:24</date><authorinitials>RhodriCusack</authorinitials></revision><revision><revnumber>1</revnumber><date>2006-08-16 11:07:18</date><authorinitials>RhodriCusack</authorinitials></revision></revhistory></articleinfo><para><inlinemediaobject><imageobject><imagedata fileref="https://imaging.mrc-cbu.cam.ac.uk/imaging/PrinciplesRandomEffects?action=AttachFile&amp;do=get&amp;target=mrclogo.gif"/></imageobject><textobject><phrase>mrclogo.gif</phrase></textobject></inlinemediaobject> </para><section><title>Principles of random effect analyses</title><para>These analyses are also called second level analyses, and concentrate on the variation of activation between subjects in deciding the significance levels for SPMs. </para><para>For a comprehensive description of this problem in SPM, see the <ulink url="http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/pdfs/Ch12.pdf">random effects chapter</ulink> of the <ulink url="http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/">Human Brain Function book</ulink> - second edition. </para><para>See also the <ulink url="http://www.fil.ion.ucl.ac.uk/spm/doc/biblio/Keyword/RFX.html">RFX section</ulink> of the FIL/SPM bibliography. </para><para>There is a <ulink url="http://psyphz.psych.wisc.edu/~oakes/spm/spm_random_effects.html">random effects discussion on the Wisconsin site</ulink> </para><para>Get a fuller picture in <ulink url="http://www.bodowinter.com/tutorial/bw_LME_tutorial.pdf">this tutorial</ulink> or <ulink url="http://www.sfs.uni-tuebingen.de/~hbaayen/publications/baayenDavidsonBates.pdf">this one</ulink>. </para></section></article>