Results 1 - 25 of 45 results out of about 609 pages. (0.90 seconds)
- MakingHomePages . . . 7 matches
- ...ake yourself a wiki-specific personal page connected to your username (e.g. mine is MatthewBrett), click on your username in the bar at the top or at the left of the page (dependin...
- SpmTips . . . 2 matches
- ...7
that prevents the necessary GUI callback being executed in the
contrast GUI. I (MatthewBrett) have briefly tried to track it down, but it's a real
horror. For now, you can fix...
- SpmMiniCourse2007 . . . 2 matches
- ...| [[attachment:cbu_spm_course_2007_rc_biophysics.ppt]] ||
||Spatial Preprocessing ||MatthewBrett ||realignment, normalisation, smoothing, segmenting || [[attachment:cbu_spm_course_...
- RemoveBadScans . . . 2 matches
- ...r SPM99. It will not work with SPM2 or SPM5. To remove scans in SPM2 and SPM5, I (MatthewBrett) would recommend that you:
1. Find a way of doing any slice timing correction usi...
- DiffusionFdtNotes . . . 2 matches
- ...dt diffusion analysis =
For CBU data.
These are just notes of work in progress by MatthewBrett.
* FDT documentation: http://www.fmrib.ox.ac.uk/fsl/fdt/index.html
* FDT FAQ ent...
- DesignBasics . . . 2 matches
- ...gn basics =
Please see Rik Henson's excellent discussion of fMRI DesignEfficiency
MatthewBrett gave a talk at HBM2006 on [[http://imaging.mrc-cbu.cam.ac.uk/pdfs/common_errors.pdf...
- AnalysisDefaults . . . 2 matches
- ...alyze in SPM, with some discussion of the AnalysisPrinciples involved. Personally (MatthewBrett) I would recommend that someone new to imaging, or new to SPM, does a few analyses ...
- WikiWord . . . 1 match
- ...e word, surrounded by characters that are not upper case.
WikiWord examples: are MatthewBrett, HelpOnLinking, WikiName, !One2Three. Note that the last is a WikiWord, where I su...
- UsingThisWiki . . . 1 match
- ...ase sign your edits somewhere by leaving your login name, e.g. I just wrote this ([[MatthewBrett|MyName]])
== Making home pages ==
Please see CbuBaseWiki:MakingHomePages
== Confi...
- UsingAnalyze . . . 1 match
- ...egularly.
* [[#Index|Return to Index]]
Page written by [[http://www.sph.sc.edu/comd/rorden/|Chris Rorden]], MatthewBrett and [[mailto:adrian.owen@mrc-cbu.cam.ac.uk|Adrian Owen.]]...
- UncorrectedThreshold . . . 1 match
- ...m in X Y and Z directions, and the example analysis had 200 degrees of freedom)
I (MatthewBrett) personally prefer less arbitrary thresholds for reporting suggestive results, such...
- TipsForSuccessfulScanning . . . 1 match
- ... scanner. Please sign all your tips so we know where they came from. For example, MatthewBrett wrote this text.
=== Subjects ===
1. Pre-test your subjects the week before at th...
- SpmQuickStart . . . 1 match
- ...ab-Book.pdf|SPM course lab book]] practical excercises to get a feel for SPM.
Of course, see also the SpmManuals, which include step-by-step guides to analyses.
MatthewBrett
...
- SmallVolumeCorrection . . . 1 match
- ...e containing only 13 x 13 x 13 voxels, all non-zero, with 1 x 1 x 1 mm voxel size.
MatthewBrett 29/9/99
== Reference ==
<<Anchor(W96)>>
Worsley, K.J., Marrett, S., Neelin, P., V...
- SliceTiming . . . 1 match
- ...{attachment:interpolation_spike.png}}
Note that SPM uses sinc interpolation for slice timing, so will tend to spread artefacts over a wide time
window. (MatthewBrett)
RikHenson...
- SliceOverlayHelp . . . 1 match
- ...yleft, under the terms of
the GNU public licence; see licence.man or http://www.gnu.org/copyleft
Still beta - take care. Please report problems to Matthew Brett
}}}
MatthewBrett...
- SiemensDiffusionImages . . . 1 match
- ... from isotropy (equal diffusion in all directions).
See http://www.medical.siemens.com/siemens/sv_SE/gg_mr_FBAs/files/brochures/DTI_HT_FINAL_HI.pdf for more detail.
MatthewBrett...
- ReverseNormalization . . . 1 match
- ...n.mat` file), leave the voxel sizes and bounding box as default, and the select the Apply to option to apply these inverse parameters to an image in template space...
MatthewBrett...
- ProcessingSmoothing . . . 1 match
- ...of functional areas that have not been very well-matched with normalization, but I (MatthewBrett) know of no direct evidence to support this. Probably more importantly, it can inc...
- PrinciplesStatistics . . . 1 match
- ...to Andrew Holmes, Jon Simons and Thomasin Andrews for their helpful comments on various drafts of this page. Of course any errors are all mine...
----
MatthewBrett ''19/8/99 (FB)''...
- PrinciplesRandomFields . . . 1 match
- ...from anyone with suggestions for improvements, detected errors, or other feedback.
MatthewBrett 19/8/99 ''(FB)''
== References ==
Worsley, K.J., Marrett, S., Neelin, P., and Eva...
- PrinciplesMultipleComparisons . . . 1 match
- ...Another method that has been widely used is to use an UncorrectedThreshold. In my (MatthewBrett) view, this method can be extremely misleading to your readers, and should be avoid...
- MniTalairach . . . 1 match
- ...iderably better using an automated approach. Kalina Christoff, RhodriCusack and I (MatthewBrett) used this method for an abstract presented at HBM - see http://www.mrc-cbu.cam.ac....
- MarsBar . . . 1 match
- ...e CBU computing page]]).
MarsBaR should be available via the toolboxes button (let MatthewBrett know if not).
You can also make MarsBaR available by manually adding the path:
To...
- LearningUnix . . . 1 match
- ...tory after you have started SPM. Warning: don't change directory within matlab/SPM, using the "cd" command in the matlab window; it may not work as expected.
MatthewBrett 11/10/99...