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| ||<100% bgcolor="#FFFF99">'''Using a field-map to undistort EPIs'''[[BR]][wiki:FmBackground Background][[BR]][wiki:FmPower Improvement in power!][[BR]][wiki:FmFieldmaps Acquiring fieldmaps][[BR]][wiki:FmDownload Download][[BR]][wiki:FmRequirements What you'll need to undistort an EPI data series][[BR]][wiki:FmReference Guide and reference][[BR]][wiki:FmExample Step-by-step example][[BR]][wiki:FmBatch Batch mode]|| | ||<100% bgcolor="#FFFF99">'''Using a field-map to undistort EPIs'''<<BR>>[[FmBackground|Background]]<<BR>>[[FmPower|Improvement in power!]]<<BR>>[[FmFieldmaps|Acquiring fieldmaps]]<<BR>>[[FmDownload|Download]]<<BR>>[[FmRequirements|What you'll need to undistort an EPI data series]]<<BR>>[[FmReference|Guide and reference]]<<BR>>[[FmExample|Step-by-step example]]<<BR>>[[FmBatch|Batch mode]]|| |
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| A reference guide to the batch mode parameters in [http://imaging.mrc-cbu.cam.ac.uk/pdfs/fm_batchmodedescription_v3p03.pdf PDF format is here.] | A reference guide to the batch mode parameters in [[http://imaging.mrc-cbu.cam.ac.uk/pdfs/fm_batchmodedescription_v3p03.pdf|PDF format is here.]] |
Using a field-map to undistort EPIs |
Batch mode
There is a batch method that allows you to write MATLAB scripts that automate undistortion.
A reference guide to the batch mode parameters in PDF format is here.
An example routine is given in the exampledataset directory (see step-by-step example).