Diff for "FetchingData" - MRC CBU Imaging Wiki
location: Diff for "FetchingData"
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Revision 10 as of 2013-03-07 21:23:56
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= Fetching and converting imaging data to analyze = = Fetching and converting imaging data =
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 * CbuRawDataLocation
 * WbicDataLocation
 * [http://pvconv.sourceforge.net Converting Bruker data] to AnalyzeFormat
 * ImageJ
 * FourDtoThreeD image conversion
 * ByteSwapping data
== Data location ==

For old WBIC Bruker data see BrukerDataLocation.

Data from the CBU scanner is stored in the `/mridata/cbu` directory in the CBU filespace.

CBU scanner structural scans are in `/imaging/local/structurals/cbu`. WBIC structural scans in `/imaging/local/structurals/wbic`.

See CbuComputingResources for details of the automounting system.

== Other possibly useful data processing ==

 * [[http://pvconv.sourceforge.net|Converting Bruker data]] to [[FormatAnalyze|analyze format]]
 * [[Ana4Dto3D|4D to 3D image conversion]]
 * [[ImageJ|Using ImageJ to manipulate data]]
 * ByteConversion - byte swapping data for compatibility with different computer platforms

Fetching and converting imaging data

Data location

For old WBIC Bruker data see BrukerDataLocation.

Data from the CBU scanner is stored in the /mridata/cbu directory in the CBU filespace.

CBU scanner structural scans are in /imaging/local/structurals/cbu. WBIC structural scans in /imaging/local/structurals/wbic.

See CbuComputingResources for details of the automounting system.

Other possibly useful data processing

CbuImaging: FetchingData (last edited 2013-03-07 21:23:56 by localhost)