802
Comment:
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800
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Deletions are marked like this. | Additions are marked like this. |
Line 4: | Line 4: |
1. {{{Code to set up parameters across all the datasets | A. {{{Code to set up parameters across all the datasets |
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1. {{{Loop over Subjects and Sessions | A. {{{Loop over Subjects and Sessions |
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1.#2 {{{ | 1. {{{ |
Here is a typical structure for a batch script
- {{{Code to set up parameters across all the datasets
and do bits of analysis that are can be grouped }}}
- {{{Loop over Subjects and Sessions and perform the Main Crunch
}}}
- E.g.
% reorientation, slice timing do_time_place5 realign_spm5 smooth_spm5 % hp filter MYV.hf_cut = 60;
% Run models for sb = 1:length(MYV.subjects) for ss = 1:length(MYV.sesses) one_sub_sess_model_moves5(MYV, sb, ss); one_sub_sess_con_moves5(MYV, sb, ss); end end
Here
do_time_placeBR realign_spm5BR smooth_spm5BR one_sub_sess_model_moves5 (OneSubSess)BR
and
one_sub_sess_con_moves5BR
are subscripts tailored to specialised parts of the sequence.