<> ---- ''' Contents ''' <> ---- = Getting started = Once installed, to use the Automated Analysis system, first add the paths containing the aa components to Matlab. To do this at the CBU, for Siemens data type >> aa_ver1 and for Bruker data type >> aa_ver05 = Manuals = For aa version 1.0 and above, this Wiki supecedes the Word versions of the manuals previously provided. = Examples = Example user scripts are in the examples directory of your aa installation. At the CBU, these are ||aa version 1.0 (Siemens data)||/imaging/local/spm/aa/aa_ver1.0/examples|| ||aa version 0.5 (Bruker data)||/imaging/local/spm/aa/aa_ver0.5/examples|| = Contributions = As well as the convenient features, hopefully the main contribution is as a framework we can use to share our analysis knowledge (tricks, code). If you have contributions in the form of: - bug reports - suggestions for improvements in the documentation - new modules - new recipes please send them to me and I will try to fix or incorporate them promptly. Bruker: See how the system works If you are interested in the guts, the main engine is here: /imaging/local/spm/aa/aa_ver0.4_beta/aa_engine the recipe and parameter set definition files are here: /imaging/local/spm/aa/aa_ver0.4_beta/aa_recipes_and_parametersets the modules are here /imaging/local/spm/aa/aa_ver0.4_beta/aa_modules