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= Sequences for Diffusion = On the 4th of December there will be a meeting held at the Unit to discuss the new standard protocol for acquisition of diffusion weighted images. Here you can find some generic guidelines for chosing the voxel size/shape for you diffusion MRI experiment. attachment:Diffuson_voxel_size.doc |
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For the moment we are using FSL | |
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We are just getting going with diffusion analysis. For the moment we are using FSL |
See SiemensDiffusionImages for an explanation of the images that the Siemens Trio writes out from a diffusion run. |
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We had in informal meeting to share experience between the WBIC, FSL, and CSL: DiffusionMeeting_10_10_2007 | We had in informal meeting to share experience between the WBIC, FSL, and CSL: DiffusionMeeting10May2007 |
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Matthew |
There was a meeting of the [:MriPhysicsAndAnalysisForCognitiveNeuroscientists:MR physics & analysis for cognitive neuroscientists] group in November 2009 on DTI. |
Sequences for Diffusion
On the 4th of December there will be a meeting held at the Unit to discuss the new standard protocol for acquisition of diffusion weighted images. Here you can find some generic guidelines for chosing the voxel size/shape for you diffusion MRI experiment. attachment:Diffuson_voxel_size.doc
Analyzing diffusion data
For the moment we are using FSL
See SiemensDiffusionImages for an explanation of the images that the Siemens Trio writes out from a diffusion run.
Here are some notes on getting going with the fdt package for diffusion analysis in FSL: DiffusionFdtNotes
We had in informal meeting to share experience between the WBIC, FSL, and CSL: DiffusionMeeting10May2007
There was a meeting of the [:MriPhysicsAndAnalysisForCognitiveNeuroscientists:MR physics & analysis for cognitive neuroscientists] group in November 2009 on DTI.