Diff for "1st_level_analysis_2" - MRC CBU Imaging Wiki
location: Diff for "1st_level_analysis_2"
Differences between revisions 21 and 29 (spanning 8 versions)
Revision 21 as of 2011-08-24 12:59:38
Size: 1921
Comment:
Revision 29 as of 2013-03-07 21:22:58
Size: 2401
Editor: localhost
Comment: converted to 1.6 markup
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
__'''1st Level Analysis 2: Basis functions, parametric modulation and correlated regressors'''__[[BR]] __'''1st Level Analysis 2: Basis functions, parametric modulation and correlated regressors'''__<<BR>>
Line 3: Line 3:
You can download a copy of Gayaneh and Oriel's talks here: attachment:BasisFunctions.ppt attachment:ParametricMod.ppt [[BR]] You can download a copy of Gayaneh and Oriel's talks here: [[attachment:BasisFunctions.ppt]] [[attachment:ParametricMod.ppt]] <<BR>>
Line 6: Line 6:
__'''Web Resources'''__[[BR]] __'''Web Resources'''__<<BR>>
Line 8: Line 8:
Below is a list of web resources used in the talk [[BR]][[BR]]
'''Basis Functions''' [[BR]]
[http://www.fourier-series.com/fourierseries2/fourier_series_tutorial.html Fourier Series Tutorial][[BR]]
[http://www.texample.net/tikz/examples/convolution-of-two-functions/ Animated illustration of the convolution of two functions][[BR]]
[http://www-structmed.cimr.cam.ac.uk/Course/Convolution/convolution.html The convolution theorem and its applications][[BR]]
Rik's SPM GLM powperpoint from our imaging wiki attachment:SPM.ppt [[BR]][[BR]]
'''Correlated regressors'''[[BR]]
[http://www.matthijs-vink.com/tools.html Design Magic toolbox- Multicollinearity assessment for fMRI for SPM][[BR]]
Below is a list of web resources used in the talk <<BR>><<BR>>
'''Basis Functions''' <<BR>>
[[http://www.fourier-series.com/fourierseries2/fourier_series_tutorial.html|Fourier Series Tutorial]]<<BR>>
[[http://www.texample.net/tikz/examples/convolution-of-two-functions/|Animated illustration of the convolution of two functions]]<<BR>>
[[http://www-structmed.cimr.cam.ac.uk/Course/Convolution/convolution.html|The convolution theorem and its applications]]<<BR>>
[[http://www.fil.ion.ucl.ac.uk/spm/doc/books/hbf2/|A link to all the chapters of the Human Brain Function]]<<BR>><<BR>>

Rik's SPM GLM powperpoint from our imaging wiki [[attachment:SPM.ppt]] <<BR>><<BR>>
'''Correlated regressors'''<<BR>><<BR>>
[[http://www.matthijs-vink.com/tools.html|Design Magic toolbox- Multicollinearity assessment for fMRI for SPM]]<<BR>>
Line 17: Line 18:
__'''References'''__[[BR]] __'''References'''__<<BR>>
Line 19: Line 20:
'''Basis Functions'''[[BR]] '''Basis Functions'''<<BR>>
Line 21: Line 22:
Human Brain Function, Academic press, 2nd edition, 2003 (Chapter 10)[[BR]] Human Brain Function, Academic press, 2nd edition, 2003 (Chapter 10)<<BR>>
Line 23: Line 24:
Functional Magnetic Resonance Imaging (Scott A Huttel et al.)[[BR]] Functional Magnetic Resonance Imaging (Scott A Huttel et al.)<<BR>>
Line 25: Line 26:
R.N.A. Henson, M.D. Rugg, and K.J. Friston. (2001) The choice of basis functions in event-related fMRI. NeuroImage, 13(6):149, Note: Supplement 1 [[BR]]
[http://www.fil.ion.ucl.ac.uk/spm/doc/papers/rnah_choice.pdf PDF of paper]
R.N.A. Henson, M.D. Rugg, and K.J. Friston. (2001) The choice of basis functions in event-related fMRI. NeuroImage, 13(6):149, Note: Supplement 1 <<BR>>
[[http://www.fil.ion.ucl.ac.uk/spm/doc/papers/rnah_choice.pdf|PDF of paper]]
Line 28: Line 29:
[[attachment:Dale.pdf]] Selective Averaging of Rapidly Presented Individual Trials Using fMRI<<BR>>
[[attachment:Josephs.pdf]] Event-Related fMRI<<BR>>
[[attachment:Friston.pdf]] Event-Related fMRI: Characterizing Differential Responses<<BR>>
[[attachment:Friston2.pdf]] Nonlinear Event-Related Responses in fMRI<<BR>><<BR>>
'''Parametric regressors'''<<BR>>
Line 29: Line 35:
'''Parametric regressors'''[[BR]] Characterizing stimulus-response function using nonlinear regressors in parametric fMRI experiments’, Buchel et al, Neuroimage, 1998 <<BR>>
Line 31: Line 37:
Characterizing stimulus-response function using nonlinear regressors in parametric fMRI experiments’, Buchel et al, Neuroimage, 1998 [[BR]] [[http://www.fil.ion.ucl.ac.uk/spm/doc/papers/cb_characterizing.pdf|PDF of paper]]
Line 33: Line 39:
[http://www.fil.ion.ucl.ac.uk/spm/doc/papers/cb_characterizing.pdf PDF of paper]

Using parametric regressors to disentangle properties of multi-feature processes’, Wood et al, Behavioural and Brain Functions, 2008 doi:10.1186/1744-9081-4-38[[BR]]
[http://www.behavioralandbrainfunctions.com/content/4/1/38/ Link to paper]
Using parametric regressors to disentangle properties of multi-feature processes’, Wood et al, Behavioural and Brain Functions, 2008 doi:10.1186/1744-9081-4-38<<BR>>
[[http://www.behavioralandbrainfunctions.com/content/4/1/38/|Link to paper]]

1st Level Analysis 2: Basis functions, parametric modulation and correlated regressors

You can download a copy of Gayaneh and Oriel's talks here: BasisFunctions.ppt ParametricMod.ppt

Web Resources

Below is a list of web resources used in the talk

Basis Functions
Fourier Series Tutorial
Animated illustration of the convolution of two functions
The convolution theorem and its applications
A link to all the chapters of the Human Brain Function

Rik's SPM GLM powperpoint from our imaging wiki SPM.ppt

Correlated regressors

Design Magic toolbox- Multicollinearity assessment for fMRI for SPM

References

Basis Functions

Human Brain Function, Academic press, 2nd edition, 2003 (Chapter 10)

Functional Magnetic Resonance Imaging (Scott A Huttel et al.)

R.N.A. Henson, M.D. Rugg, and K.J. Friston. (2001) The choice of basis functions in event-related fMRI. NeuroImage, 13(6):149, Note: Supplement 1
PDF of paper

Dale.pdf Selective Averaging of Rapidly Presented Individual Trials Using fMRI
Josephs.pdf Event-Related fMRI
Friston.pdf Event-Related fMRI: Characterizing Differential Responses
Friston2.pdf Nonlinear Event-Related Responses in fMRI

Parametric regressors

Characterizing stimulus-response function using nonlinear regressors in parametric fMRI experiments’, Buchel et al, Neuroimage, 1998

PDF of paper

Using parametric regressors to disentangle properties of multi-feature processes’, Wood et al, Behavioural and Brain Functions, 2008 doi:10.1186/1744-9081-4-38
Link to paper

CbuImaging: 1st_level_analysis_2 (last edited 2013-03-07 21:22:58 by localhost)