UsingFreesurfer - MRC CBU Imaging Wiki

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Type the missing letters from: He's no ded, he's jus resing hs eys

location: UsingFreesurfer

Using Freesurfer

See FreesurferInformation for details on running the software, and help links.

These are just some notes to remind me what I am doing as I go.

  • set freesurfer data directory
  • run recon-all with nifti image as input

DanStructurals