FmBatch - MRC CBU Imaging Wiki

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||<tablewidth="648px"> ||<100% bgcolor="#FFFF99">Using a field-map to undistort EPIs [wiki:FmBackground Background] [wiki:FmPower Improvement in power!] [wiki:FmFieldmaps Acquiring fieldmaps] [wiki:FmDownload Download] [wiki:FmRequirements What you'll need to undistort an EPI data series] [wiki:FmReference Guide and reference] [wiki:FmExample Step-by-step example] [wiki:FmBatch Batch mode] || ||

Batch mode

There is a batch method that allows you to write MATLAB scripts that automate undistortion.

A reference guide to the batch mode parameters in [http://imaging.mrc-cbu.cam.ac.uk/pdfs/fm_batchmodedescription_v3p03.pdf PDF format is here.]

An example routine is given in the exampledataset directory (see step-by-step example).